EY711118

Overview
NameEY711118
Unique NameEY711118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 63/185 (34.05%), Postives = 109/185 (58.92%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588
            RKIV++TNIAETS+T++ IV+V+D G  K++ Y+ + +V  L    +S+A+  QR GRAGR Q G  + L+  +S    + P   PEILR+ L N VL   K+ + +    +F+    D P  + +  A+ +L  +G LD    LT +G++++    DP+++K +V +  + C + +L + + L+
Sbjct:  725 RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 907          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_MOUSE (Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 63/185 (34.05%), Postives = 109/185 (58.92%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588
            RKIV++TNIAETS+T++ IV+V+D G  K++ Y+ + +V  L    +S+A+  QR GRAGR Q G  + L+  +S    + P   PEILR+ L N VL   K+ + +    +F+    D P  + +  A+ +L  +G LD    LT +G++++    DP+++K +V +  + C + +L + + L+
Sbjct:  748 RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 930          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_CHICK (Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21
Identity = 64/185 (34.59%), Postives = 110/185 (59.46%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF----MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588
            RKIV++TNIAETS+TI+ IV+V+D G  K++ Y+ + +V  L    +SK++  QR GRAGR Q G  + L+  +S  + +     PEILR+ L N V+   K+ + +    +F    +D P  + +  A+ +L  +G LD    LT +G+++++   DP+++K +V +  Y C + +L I + L+
Sbjct:  768 RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLF-PRSRLDKMPTYQVPEILRTPLENLVVQ-AKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT 950          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 63/185 (34.05%), Postives = 108/185 (58.38%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588
            RKIV++TNIAETS TI+ IV+V+D G  K++ Y+ + +V  L    +S+A+  QR GRAGR Q G  + L+  +S    + P   PEILR+ L N VL   K+ + +    +F+    D P  + +  A+ +L  +G LD    LT +G++++    +P+++K +V +  + C + +L + + L+
Sbjct:  725 RKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT 907          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YL540_MIMIV (Putative ATP-dependent RNA helicase L540 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L540 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL--------GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDP-QMSKMLVESPKYNCSNEILSISAMLSVPN 597
            +K+V++TN+AE+SLTIDG+VYVID G+     ++P    + L    +SKA A QR GR GRT+PG C+ L T++ F+  L     P+ILR ++   ++ + ++        GI+  +    MDPP    +     + +    +DD+G LT++G   ++F   P      L+ + +  C+ E   I AM    N
Sbjct:  315 QKLVMATNVAESSLTIDGLVYVIDSGYELSSRFDPECYGQILEKKFVSKAQALQRRGRVGRTEPGVCYHLLTKQQFDG-LADYPTPDILRQDITMDLIKIIQVSPNKTYAEGIN--MMNQLMDPPLRSHINATRNLFDLYNVVDDNGILTQVGIVATQFSSLPLNRILFLIYAFELQCAREASIIVAMTEFLN 504          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: C3H4_ORYSJ (Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=Os01g0256800 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL-----KKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 453
            RK++++TNIAE+S+TI G+ YVID   + Q  ++P  + +S  +  +SK+ A QR GR GRT  G+ +RL T   F N L    YP ILR +L   VL +     + +    ++    +DPP  + +  ALE L  + ALD
Sbjct:  318 RKVILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRKTDSAELVWVSKSQAEQRKGRTGRTCDGQIYRLVT-GPFYNSLTDHEYPAILRLSLREQVLMICCAESRAMNDPHVLLQKVLDPPDSDVVEDALESLVQIRALD 457          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFK5 (Putative RNA Helicase B962L OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-084 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRS-------NLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALE--VLNYLGALDDDG-NLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591
            R+++VST +AET LTI+ + YVIDPG+ +  + Y P      L+  P +++   QR GR GR  PG  + LYT+  F   +  Q YPEI+         N+    +   K G+  +   D +DPP  + L  ALE  ++  L    + G  LT++G+  S F  L  + ++M      +  + ++I +I A++SV
Sbjct:  348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSVETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLNIVVETIKKNKEGVFKVQEIDMLDPPPTDALASALERAIVGGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFWA (Putative RNA Helicase B962L OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-082 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591
            R+++VST +AET LTI+ + YVIDPG+ +  + Y P      L+  P +++   QR GR GR  PG  + LYT+  F   +  Q YPEI+        L+  V T+K  K G+      D +DPP  + L  A+E     G L   +    LT++G+  S F  L  + ++M      +  + ++I +I A++SV
Sbjct:  348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFP4 (Putative RNA Helicase B962L OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-084 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591
            R+++VST +AET LTI+ + YVIDPG+ +  + Y P      L+  P +++   QR GR GR  PG  + LYT+  F   +  Q YPEI+        L+  V T+K  K G+      D +DPP  + L  A+E     G L   +    LT++G+  S F  L  + ++M      +  + ++I +I A++SV
Sbjct:  348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFB7 (Putative RNA helicase B962L OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-072 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591
            R+++VST +AET LTI+ + YVIDPG+ +  + Y P      L+  P +++   QR GR GR  PG  + LYT+  F   +  Q YPEI+        L+  V T+K  K G+      D +DPP  + L  A+E     G L   +    LT++G+  S F  L  + ++M      +  + ++I +I A++SV
Sbjct:  348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540          
The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHX30_RAT9.132e-2234.05Putative ATP-dependent RNA helicase DHX30 OS=Rattu... [more]
DHX30_MOUSE9.132e-2234.05Putative ATP-dependent RNA helicase DHX30 OS=Mus m... [more]
DHX30_CHICK1.558e-2134.59Putative ATP-dependent RNA helicase DHX30 OS=Gallu... [more]
DHX30_PONAB4.532e-2134.05Putative ATP-dependent RNA helicase DHX30 OS=Pongo... [more]
YL540_MIMIV1.904e-1932.64Putative ATP-dependent RNA helicase L540 OS=Acanth... [more]
C3H4_ORYSJ1.277e-1537.59Zinc finger CCCH domain-containing protein 4 OS=Or... [more]
H962L_ASFK52.845e-1531.79Putative RNA Helicase B962L OS=African swine fever... [more]
H962L_ASFWA3.716e-1532.82Putative RNA Helicase B962L OS=African swine fever... [more]
H962L_ASFP43.716e-1532.82Putative RNA Helicase B962L OS=African swine fever... [more]
H962L_ASFB73.716e-1532.82Putative RNA helicase B962L OS=African swine fever... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bp
TTTGAACCTGCTCCACCTCCAAGTAAGGAAGGTGGCCCCCCTGGAAGAAA
GATTGTGGTCTCTACAAACATAGCAGAAACTTCTTTGACCATAGATGGGA
TAGTTTATGTTATAGACCCAGGTTTTGCTAAACAAAAAGTTTATAATCCA
CGTGTGCGTGTGGAATCGTTATTGGTTTCTCCAATATCGAAAGCAAGTGC
ACATCAGCGGTCTGGGCGTGCTGGAAGAACTCAGCCAGGAAAATGTTTCC
GACTCTACACTGAGAAAAGTTTTAATAATGATCTGCAGCCGCAGACATAT
CCAGAAATATTACGTTCAAACCTTGCAAATACAGTCCTTACATTAAAGAA
GCTGGGTATTGATGATTTAGTGCATTTTGATTTTATGGACCCTCCTGCTC
CTGAGACACTGATGCGAGCATTAGAAGTTTTGAATTATTTGGGAGCACTG
GACGATGATGGAAACCTGACTGAAATGGGGGAGAAGATGAGTGAATTTCC
ACTAGATCCTCAAATGTCGAAGATGCTCGTTGAGAGTCCTAAATACAACT
GCTCAAATGAAATTCTTTCCATTTCTGCCATGCTTTCAGTACCCAATTGC
TTTGTCCGGCCTAGGGAGGCTCAAAAAGCTGCAGATGAAGCAAAAAGCCA
GGTTTGGTCACATTGATGGGGGATCCCCTTACACTCCTGAATGTATACCA
TGCTTTACAAGCAAACATGGAGGATCCATCTTGGGGTTAATGACAATTTT
GTCAATCATAGGGCATTGAAGTCCGCTGGAAATGGTAAACACAGCTTGTT
TCGATCATGGCCCGGGTCAACCTCAAGTTTGCAGCATGATTTTAAGGTCG
GGACTACTTGGCAACTTCAAAAAGCATGGTGGG
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