EY711118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22 Identity = 63/185 (34.05%), Postives = 109/185 (58.92%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588 RKIV++TNIAETS+T++ IV+V+D G K++ Y+ + +V L +S+A+ QR GRAGR Q G + L+ +S + P PEILR+ L N VL K+ + + +F+ D P + + A+ +L +G LD LT +G++++ DP+++K +V + + C + +L + + L+ Sbjct: 725 RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 907
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_MOUSE (Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22 Identity = 63/185 (34.05%), Postives = 109/185 (58.92%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588 RKIV++TNIAETS+T++ IV+V+D G K++ Y+ + +V L +S+A+ QR GRAGR Q G + L+ +S + P PEILR+ L N VL K+ + + +F+ D P + + A+ +L +G LD LT +G++++ DP+++K +V + + C + +L + + L+ Sbjct: 748 RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 930
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_CHICK (Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21 Identity = 64/185 (34.59%), Postives = 110/185 (59.46%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF----MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588 RKIV++TNIAETS+TI+ IV+V+D G K++ Y+ + +V L +SK++ QR GRAGR Q G + L+ +S + + PEILR+ L N V+ K+ + + +F +D P + + A+ +L +G LD LT +G+++++ DP+++K +V + Y C + +L I + L+ Sbjct: 768 RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLF-PRSRLDKMPTYQVPEILRTPLENLVVQ-AKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT 950
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21 Identity = 63/185 (34.05%), Postives = 108/185 (58.38%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588 RKIV++TNIAETS TI+ IV+V+D G K++ Y+ + +V L +S+A+ QR GRAGR Q G + L+ +S + P PEILR+ L N VL K+ + + +F+ D P + + A+ +L +G LD LT +G++++ +P+++K +V + + C + +L + + L+ Sbjct: 725 RKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT 907
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YL540_MIMIV (Putative ATP-dependent RNA helicase L540 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L540 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19 Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL--------GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDP-QMSKMLVESPKYNCSNEILSISAMLSVPN 597 +K+V++TN+AE+SLTIDG+VYVID G+ ++P + L +SKA A QR GR GRT+PG C+ L T++ F+ L P+ILR ++ ++ + ++ GI+ + MDPP + + + +DD+G LT++G ++F P L+ + + C+ E I AM N Sbjct: 315 QKLVMATNVAESSLTIDGLVYVIDSGYELSSRFDPECYGQILEKKFVSKAQALQRRGRVGRTEPGVCYHLLTKQQFDG-LADYPTPDILRQDITMDLIKIIQVSPNKTYAEGIN--MMNQLMDPPLRSHINATRNLFDLYNVVDDNGILTQVGIVATQFSSLPLNRILFLIYAFELQCAREASIIVAMTEFLN 504
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: C3H4_ORYSJ (Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=Os01g0256800 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL-----KKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 453 RK++++TNIAE+S+TI G+ YVID + Q ++P + +S + +SK+ A QR GR GRT G+ +RL T F N L YP ILR +L VL + + + ++ +DPP + + ALE L + ALD Sbjct: 318 RKVILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRKTDSAELVWVSKSQAEQRKGRTGRTCDGQIYRLVT-GPFYNSLTDHEYPAILRLSLREQVLMICCAESRAMNDPHVLLQKVLDPPDSDVVEDALESLVQIRALD 457
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFK5 (Putative RNA Helicase B962L OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-084 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRS-------NLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALE--VLNYLGALDDDG-NLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591 R+++VST +AET LTI+ + YVIDPG+ + + Y P L+ P +++ QR GR GR PG + LYT+ F + Q YPEI+ N+ + K G+ + D +DPP + L ALE ++ L + G LT++G+ S F L + ++M + + ++I +I A++SV Sbjct: 348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSVETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLNIVVETIKKNKEGVFKVQEIDMLDPPPTDALASALERAIVGGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFWA (Putative RNA Helicase B962L OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-082 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591 R+++VST +AET LTI+ + YVIDPG+ + + Y P L+ P +++ QR GR GR PG + LYT+ F + Q YPEI+ L+ V T+K K G+ D +DPP + L A+E G L + LT++G+ S F L + ++M + + ++I +I A++SV Sbjct: 348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFP4 (Putative RNA Helicase B962L OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-084 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591 R+++VST +AET LTI+ + YVIDPG+ + + Y P L+ P +++ QR GR GR PG + LYT+ F + Q YPEI+ L+ V T+K K G+ D +DPP + L A+E G L + LT++G+ S F L + ++M + + ++I +I A++SV Sbjct: 348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: H962L_ASFB7 (Putative RNA helicase B962L OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-072 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQ-KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN-----LANTVLTLK--KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCS-NEILSISAMLSV 591 R+++VST +AET LTI+ + YVIDPG+ + + Y P L+ P +++ QR GR GR PG + LYT+ F + Q YPEI+ L+ V T+K K G+ D +DPP + L A+E G L + LT++G+ S F L + ++M + + ++I +I A++SV Sbjct: 348 RRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPE-WAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVF-EQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSV 540 The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bpback to top |