EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.687e-60
Identity = 121/254 (47.64%), Postives = 164/254 (64.57%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK-MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKIGLHLRG 772
            RL NR++  I    +A+ +L+  L   A   K+  + SG   +  +WD+L+F+KI+  LGG+VR M +GA+P+S  V+ FL+   GCQ  EGYG TE +        GD  +GHVG+P P   +KLVDV EMNY +       GE+CV+G  VF+GY K+  +T E +D DGWLHTGDIG WLP G LKIIDRKK+IFKLAQGEY+APEKIEN+Y + + V Q F++G+S  + L+A+V  D + L      RG
Sbjct:  369 RLLNRMFDRIFG--QANTSLKRWLLDFASKRKEADVRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRTALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKLVDVEEMNYLASKG---EGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVVVPDVESLPSWAQKRG 617          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.411e-51
Identity = 115/247 (46.56%), Postives = 155/247 (62.75%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSG-QTP--SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS-GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPD 742
            R++ RI + +   +     L   LF  AYN K  +I  G + P   K+ D + F+KI++ LGG+VR + SG++PLS D   FL+V   C V++GYG +E  C   A  + D+ S G +G P  + EIKLVDVPE+ Y S  +    GE+C+RGP +  GYYK+E +TRE    DGW HTGDIG W   G L I+DRKKNIFKL+QGEYVA EKIE +  K ++V Q  IYGDS  SC++AI+   P+
Sbjct:  339 RVFERIKTNVFKEISKKPALLRTLFNGAYNLKYLSIQHGFKLPIIEKVLDLVFFSKIKQALGGKVRVILSGSAPLSFDTEVFLRVVMCCCVLQGYGASE-GCGGDACKRLDDESVGTIGPPFASNEIKLVDVPELGYDSNGEVQT-GEVCLRGPSISSGYYKDEEKTREEFK-DGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEKIETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPE 582          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.718e-44
Identity = 98/245 (40.00%), Postives = 139/245 (56.73%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR----EVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A   + +RIY  + N V    + +  LF  AYN K + I  G+  + + +  VF K+R  LGG +R +  G +PLS     F+ +CF C V +GYG+TE++   +  +  D  +G VG+P   CEIKL +  E  Y + D+PHPRGEI + G IV  GYYKNE +T+    E  +G  WL TGDIG + P G LKIIDRKK++ KL  GEYV+  K+E        V     Y +S++S ++  V
Sbjct:  382 AVPEIMDRIYKNVMNKVSEMSSFQRNLFILAYNYKMEQISKGRN-TPLCNSFVFRKVRSLLGGNIRLLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESAGAGTISEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQIVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFV 625          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 8.775e-44
Identity = 98/245 (40.00%), Postives = 138/245 (56.33%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR----EVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A   + +RIY  + N V    + +  LF  AYN K + I  G+  + + D  VF K+R  LGG +R +  G +PLS     F+ +CF C V +GYG+TE++   +  +  D  +G VG+P   CEIKL +  E  Y + D+PHPRGEI + G  V  GYYKNE +T+    E  +G  WL TGDIG + P G LKIIDRKK++ KL  GEYV+  K+E        V     Y +S++S ++  V
Sbjct:  382 AVPEIMDRIYKNVMNKVSEMSSFQRNLFILAYNYKMEQISKGRN-TPLCDSFVFRKVRSLLGGNIRLLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESAGAGTISEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQSVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFV 625          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.553e-43
Identity = 99/246 (40.24%), Postives = 137/246 (55.69%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSG-QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR----EVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A   + +RIY  + N V      +  LF  AYN K + I  G  TP  + DR VF  +R  LGG +R +  G +PLS     F+ +CF C V +GYG+TE++   +  +  D  +G VG+P   CEIKL +  E  Y + D+PHPRGEI + G  V  GYYKNE +T+    E  +G  WL TGDIG + P G LKIIDRKK++ KL  GEYV+  K+E        +     Y +S++S ++  V
Sbjct:  382 AVPEIMDRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGCSTP--LCDRFVFRNVRRLLGGNIRLLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKTDFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFV 625          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.334e-43
Identity = 99/246 (40.24%), Postives = 137/246 (55.69%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSG-QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR----EVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A   + +RIY  + N V      +  LF  AYN K + I  G  TP  + DR VF  +R  LGG +R +  G +PLS     F+ +CF C V +GYG+TE++   +  +  D  +G VG+P   CEIKL +  E  Y + D+PHPRGEI + G  V  GYYKNE +T+    E  +G  WL TGDIG + P G LKIIDRKK++ KL  GEYV+  K+E        +     Y +S++S ++  V
Sbjct:  382 AVPEIMDRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGCSTP--LCDRFVFRNVRRLLGGNIRVLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFV 625          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 93/245 (37.96%), Postives = 137/245 (55.92%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI----DGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A   + +RIY  + + V+    +++ LF   Y+ K + I  G   + + + L+F K++  LGG VR M SG +PLSP    F+ VCF C + +GYG+TE+    +  +  D  +G VG+P   CEIKL D  E  YT  D+P+PRGEI + G  +  GY+KNE +T E      +G  W  TGDIG + P G L+IIDRKK++ KL  GEYV+  K+E     C  +     +  S  S +++ V
Sbjct:  373 AVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYD-APLCNLLLFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTINDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFV 616          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.549e-40
Identity = 94/260 (36.15%), Postives = 142/260 (54.62%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI----DGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKIGLHLRG 772
            A   + +RIY  + + V+    +++ LF   Y+ K + I  G   + + + ++F K++  LGG VR M SG +PLSP    F+ VCF C + +GYG+TE+    +  +  D  +G VG+P   CEIKL D  E  YT  D+P+PRGEI + G  +  GY+KNE +T E      +G  W  TGDIG + P G L+IIDRKK++ KL  GEYV+  K+E     C  +     +  S  S +++ V  +   L +    +G
Sbjct:  332 AVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYD-APLCNLILFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKG 590          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.004e-39
Identity = 92/251 (36.65%), Postives = 143/251 (56.97%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK------MWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVY-AKCKFVLQCFIYGDSFNSCLVAIVAVDPD 742
            R+  R  +GI NA+  S T++  +     +SK     +   P K      ++ R++ +KIR+ LG     F+ +G++P+S D + FL+      + +GYG+TET   +   +  +   G  G+   + E +L  VPEM Y ++     +GE+ +RGP VF+ Y+KN  +T + +D DGW  TGD+      GR+ +IDR KN FKLA GEY+APEKIEN+Y + C ++ Q F++GD   + LV IV VD D
Sbjct:  394 RILTRFEAGIKNALDKS-TVQRNVANTILDSKSARFTARGGPDKSIMNFLVYHRVLIDKIRDSLGLSNNSFIITGSAPISKDTLLFLRSALDIGIRQGYGLTETFAGVCLSEPFEKDVGSCGAIGISAECRLKSVPEMGYHADKDL--KGELQIRGPQVFERYFKNPNETSKAVDQDGWFSTGDVAFIDGKGRISVIDRVKNFFKLAHGEYIAPEKIENIYLSSCPYITQIFVFGDPLKTFLVGIVGVDVD 641          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.499e-39
Identity = 92/260 (35.38%), Postives = 142/260 (54.62%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTRE--VIDGDG--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKIGLHLRG 772
            A   + +RIY  + + V+    +++ LF   Y+ K + I  G   + + + ++F K+++ +GG VR M  G +PLSP    F+ VC  C + +GYG+TE+    +  +  D  +G VG+P   CEIKL D  E  YT  D+P+PRGEI + G  +  GY+KNE +T E   +D +G  W  TGDIG + P G L+IIDRKK++ KL  GEYV   K+E     C  +     +  S  S +++ V  +   L +    +G
Sbjct:  373 AVPEIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGYD-APLCNLILFKKVKDLVGGNVRMMLYGGAPLSPQTHRFMNVCLCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVFLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKG 631          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ACSL1_MOUSE6.687e-6047.64Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
FCSB_DICDI7.411e-5146.56Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
ACSL3_PONAB6.718e-4440.00Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
ACSL3_HUMAN8.775e-4440.00Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACSL3_MOUSE2.553e-4340.24Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL3_RAT3.334e-4340.24Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
ACSL4_HUMAN1.186e-4037.96Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapien... [more]
ACSL4_RAT1.549e-4036.15Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norv... [more]
LCF2_YEAST1.004e-3936.65Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
ACSL4_MOUSE8.499e-3935.38Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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