EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF1_SCHPO (Long-chain-fatty-acid--CoA ligase 1 OS=Schizosaccharomyces pombe GN=lcf1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.509e-38
Identity = 98/257 (38.13%), Postives = 134/257 (52.14%), Query Frame = 2
Query:   17 LYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRER-LGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN-SCLVAIVAVDPDVLKIGLHLRGSS 778
            ++  +  GI + + A+  ++  +F  AY +K + +      S + D  VFNKIR    GGR+R+  SG S LSPD   FL +   C ++ GYG+TE S      +    NL    GS  P  E+KLVD  E NY S   P PRGEI +RGP + +GY   + + +E    DGW  TGD+G   P G L+IIDRKKN+ K   GEY+A EK+E+ Y     V    +Y D      L  IV  +P V K+     G S
Sbjct:  343 VWEMVRKGIMSKLNAASAVKRSVFWTAYYTKAKLMRHNLPGSCVLDTAVFNKIRSMGTGGRLRYTLSGGSALSPDTKRFLSIVL-CPMLIGYGLTEISAAAMVQNPACFNLDDSAGSLLPCTEMKLVDCEEGNYNSHGHP-PRGEIWLRGPSLTRGYLNRDKENKESFTPDGWFRTGDVGELTPEGLLRIIDRKKNLVKTQNGEYIALEKLESRYRTSSLVSNICVYADQTKVKPLAIIVPNEPVVRKLATEQAGLS 597          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF1_YEAST (Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyces cerevisiae GN=FAA1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.571e-37
Identity = 87/239 (36.40%), Postives = 128/239 (53.56%), Query Frame = 2
Query:   11 ARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A ++  +  GI N +     L +K+F  AYN+K                LVF KIR   GG++R++ +G SP+S D  +F+     C ++ GYG+TET    + +D  +   G  G       +KLVDV E+ Y +++    +GE+ + G  V   YYKNE +T + +  DGW  TGDIG W   G LKIIDRKKN+ K   GEY+A EK+E+VY   ++V    +Y D   +  V I+
Sbjct:  365 AAVWETVRKGILNQIDNLPFLTKKIFWTAYNTKLNMQRLHIPGGGALGNLVFKKIRTATGGQLRYLLNGGSPISRDAQEFITNLI-CPMLIGYGLTETCASTTILDPANFELGVAGDLTGCVTVKLVDVEELGYFAKNN---QGEVWITGANVTPEYYKNEEETSQALTSDGWFKTGDIGEWEANGHLKIIDRKKNLVKTMNGEYIALEKLESVYRSNEYVANICVYADQSKTKPVGII 599          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.314e-36
Identity = 89/247 (36.03%), Postives = 129/247 (52.23%), Query Frame = 2
Query:   17 LYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSC--IISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLK 751
            +Y  I  GI   V +    R+K+F+ + + K+  I      S   D +VFNK++   GGR+R+  SG + L+     FL  C  C V+ GYG+TET     + + ++    +  VG P P+ E KLVD+P++ Y ++  P PRGE+ +RGP V  GY       +     DGW  TGD+G    G  L++IDRKKNI K   GEY+A EKIE  +     V     Y D  ++  V IV  D + L+
Sbjct:  350 VYELIKKGILAKVSSMPAHRQKVFSGSLSLKQYLIERNLPGSAALDAIVFNKVKAATGGRLRYCISGGAALAASTQAFLSSCI-CPVLPGYGLTETCAGSFVLSPEQWHLYANTVGFPIPSIEFKLVDIPDLGYYTDSSP-PRGEVWIRGPAVCNGYLNRPEDNKAAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVKSLNGEYIALEKIEAQFFTSPLVSNVCAYADVNHAKPVVIVNPDENGLR 594          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF3_YEAST (Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyces cerevisiae GN=FAA3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.101e-33
Identity = 83/254 (32.68%), Postives = 134/254 (52.76%), Query Frame = 2
Query:   11 ARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVL-KIGLHLR 769
            A ++  +   I   +     + +K+F +AY+ K++++      +    R+VF K+R+  GG ++++ +G S +S D   F  +   C ++ GYG+TET      ++      G VG    +   KLVDV ++ Y +++    +GE+ ++G  V   YYKN ++T      DGW  TGDI  W P G+LKIIDR+KN+ K   GEY+A EK+E+VY    +V    +Y D      V IV  +P  L K  + LR
Sbjct:  365 AAVWETVRKAILEKISDLTPVLQKIFWSAYSMKEKSVPC----TGFLSRMVFKKVRQATGGHLKYIMNGGSAISIDAQKFFSIVL-CPMIIGYGLTETVANACVLEPDHFEYGIVGDLVGSVTAKLVDVKDLGYYAKNN---QGELLLKGAPVCSEYYKNPIETAVSFTYDGWFRTGDIVEWTPKGQLKIIDRRKNLVKTLNGEYIALEKLESVYRSNSYVKNICVYADESRVKPVGIVVPNPGPLSKFAVKLR 610          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCF4_YEAST (Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyces cerevisiae GN=FAA4 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.041e-28
Identity = 79/239 (33.05%), Postives = 117/239 (48.95%), Query Frame = 2
Query:   11 ARLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIV 727
            A ++  +  GI   +       + LF   Y  K++ I      S +   L+F +IRE  GG +RF+ +G S +S D   FL     C ++ GYG+TE       ++      G  G        KLVDV ++ Y +++    +GE+  +G  +   YYKN  +T      DGW  TGDI  W P G++KIIDRKKN+ K   GEY+A EK+E++Y    +V    +Y D      V IV
Sbjct:  365 AAVWETVRKGILAKINELPGWSQTLFWTVYALKERNIPC----SGLLSGLIFKRIREATGGNLRFILNGGSAISIDAQKFLSNLL-CPMLIGYGLTEGVANACVLEPEHFDYGIAGDLVGTITAKLVDVEDLGYFAKNN---QGELLFKGAPICSEYYKNPEETAAAFTDDGWFRTGDIAEWTPKGQVKIIDRKKNLVKTLNGEYIALEKLESIYRSNPYVQNICVYADENKVKPVGIV 595          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: FAD11_MYCTU (Putative fatty-acid--CoA ligase fadD11 OS=Mycobacterium tuberculosis GN=fadD11 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.985e-25
Identity = 88/257 (34.24%), Postives = 134/257 (52.14%), Query Frame = 2
Query:    5 ASARLYNRIYSGI--TNAVKASGTLREKLFTAAYNSKKQA--IVSGQTPSKM----W---DRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD--SFNSCLVAIVA 730
            A  R++ ++ +GI  T A +     R+ L  A   + K+A  +++G++ S      W   D LV +K+RERLG G +R+  SGA+P+  + + F     G  + E +GM+E SC+ +A    D   G VG   P  + K+         +ED     GE  VRGP+V +GY K   +T E ID DGWLHTGD+      G L+++DRKK +   A G+ ++P  IEN + A C  V      GD  ++N+ L+   A
Sbjct:  224 AVPRVWEKLKAGIEFTVARETDEMKRQALAWAMSVAGKRANALLAGESMSDQLVAEWAKADELVLSKLRERLGFGELRWALSGAAPIPKETLAFF-AGIGIPIAEIWGMSELSCVATASHPRDGRLGTVGKLLPGLQGKI---------AED-----GEYLVRGPLVMKGYRKEPAKTAEAIDSDGWLHTGDVFDIDSDGYLRVVDRKKELIINAAGKNMSPANIENTILAACPMVGVMMAIGDGRTYNTALLVFDA 465          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCFH_HAEIN (Putative long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=HI0002 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.032e-24
Identity = 75/242 (30.99%), Postives = 117/242 (48.35%), Query Frame = 2
Query:    5 ASARLYNRIYSGITNAVKASGTLREKLFTAAYN----------SKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS 700
            A  R Y +IY+ + + V+ +  LR+ +F  A +          + K      +    + D+LV +K+R+ LGGR++ M  G + L P +  F     G  +  GYGMTET+  +S           +G+  P  E+K+ +                EI VRG +V +GYYK   +T +    DG+L TGD G +   G L I DR K + K + G+Y+AP+ IE+   K KF+ Q  I  D+
Sbjct:  277 AVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKYFDLRANNKAIPFLLKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHA-IGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKIGE--------------NNEILVRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQGNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADA 503          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.456e-22
Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAI--DKGDNLS-GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            ++F+GSGA+PL  DVM+ +   F   ++++GYGMTET  IIS    +KG     G  G+     E K+VD+  + +     P+  GEICVRGP V QGY+ N VQ  E     GWLHTGD+G +  GG+L ++DR K + K  +G  +AP ++E +
Sbjct:  316 LKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEYPEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLP---PNQVGEICVRGPNVMQGYFNN-VQATEFTIKQGWLHTGDLGYFDGGGQLFVVDRLKELIKY-KGFQIAPAELEGL 466          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ORA_PLAFN (Octapeptide-repeat antigen (Fragment) OS=Plasmodium falciparum (isolate NF7 / Ghana) PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.228e-22
Identity = 68/251 (27.09%), Postives = 121/251 (48.21%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKK-------QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVG---SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVD 736
            +++NR+Y+ I   +      ++ +   A N +K         +V G T        +  KI++++   +  + +G   LSP+V + L V    +  +GYG+TE++  I   D  D  +  +G   SP+   +++  ++ +   T      P+GE+ ++   +F GY+  +  T      DG+  TGDI      G L  +DR K + KL+QGEY+  E I N+Y++  FV  C  YGD      + I++VD
Sbjct:  296 KVFNRMYATIMTKINNLSRCKKWIAKQAINLRKGKNNGNFSKVVEGITN-------ISRKIKDKINPNMDVILNGGGKLSPEVAEGLSVLLNVKYYQGYGLTESTGPIFLQDVDDCNTESMGVAVSPSTRYKVRTWEIYKATDTI-----PKGELLIKSDSMFSGYFLEKESTEHAFTNDGYFKTGDIVQINDNGSLTFLDRSKGLVKLSQGEYIETEMINNLYSQIPFVNFCVAYGDDSMDGPLGIISVD 534          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.747e-21
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  206 MGSGASPLSPDVMDFLKVCFGCQ-VMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            + SG +PLS +V + +   F    + +GYG+TET+  I    +GD+  G VG   P  E K+VD+        +Q   RGE+CVRGP++  GY  N   T  +ID DGWLH+GDI  W       I+DR K++ K  +G  VAP ++E++
Sbjct:  312 IASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQ---RGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKY-KGYQVAPAELESI 457          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
LCF1_SCHPO5.509e-3838.13Long-chain-fatty-acid--CoA ligase 1 OS=Schizosacch... [more]
LCF1_YEAST3.571e-3736.40Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyc... [more]
LCF2_SCHPO2.314e-3636.03Long-chain-fatty-acid--CoA ligase 2 OS=Schizosacch... [more]
LCF3_YEAST9.101e-3332.68Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyc... [more]
LCF4_YEAST1.041e-2833.05Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyc... [more]
FAD11_MYCTU6.985e-2534.24Putative fatty-acid--CoA ligase fadD11 OS=Mycobact... [more]
LCFH_HAEIN2.032e-2430.99Putative long-chain-fatty-acid--CoA ligase OS=Haem... [more]
4CLL1_ORYSJ1.456e-2241.674-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
ORA_PLAFN7.228e-2227.09Octapeptide-repeat antigen (Fragment) OS=Plasmodiu... [more]
LUCI_PHOPY2.747e-2138.67Luciferin 4-monooxygenase OS=Photinus pyralis PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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