EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PARL1 (50S ribosomal protein L6 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplF PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.349e-45 Identity = 93/170 (54.71%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+EVP VT+TL GQDL VKGP GEL L +V V++ +S L+V +T+RA M GL RTL N+V GV+ GF K L++ GVGYRAA++G+ L L+LGFSH V IP+GI + + T I ++G DK +GQ AA IR +R PEPYKGKGVKY E I R Sbjct: 2 SRIGKYPVEVPKGVTVTLNGQDLAVKGPKGELKLTLVDDVTVEQGESGLKVAPREDTQRARAMWGLSRTLVKNIVTGVTDGFTKTLEINGVGYRAAIQGKNLQLNLGFSHDVLYPIPEGIDIKCTKPTEIVITGIDKQKVGQVAAEIRGYRGPEPYKGKGVKYAGEYIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNPW (50S ribosomal protein L6 OS=Synechococcus sp. (strain WH7803) GN=rplF PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44 Identity = 91/170 (53.53%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI +P V+++L G + VKGP GEL P V V++ D+ + V T E R++ + HGL RTL NM+ GVSKG+ KKL++VGVG RA ++G+ LV+S G+SHPV M P+GI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPDGVTVNQVDNTIVVAPTSEKRQSRERHGLCRTLVANMIEGVSKGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEMLAPEGITFAVENNTNVTVSGTDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_MICAN (50S ribosomal protein L6 OS=Microcystis aeruginosa (strain NIES-843) GN=rplF PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44 Identity = 86/170 (50.59%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ VT+ + G + VKGP G L P V ++++ L V + ++R A + HGL RTL NMV GV+ GF+K+L + GVGYRA +G LVL++G+S PV M +PDG+ V VE +T++ VSG DK A+G AA IR+ RPPEPYKGKG++Y+ EV+RR Sbjct: 2 SRIGKRPIPIPNKVTVDIDGATVTVKGPKGTLQRTLPTAVAINKDGETLLVTRQDDSRTARERHGLCRTLVANMVEGVATGFQKRLDIQGVGYRAQAQGSKLVLNVGYSKPVEMEMPDGVSVAVENSTQVIVSGIDKEAVGNTAAKIREVRPPEPYKGKGIRYLGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_MAGSM (50S ribosomal protein L6 OS=Magnetococcus sp. (strain MC-1) GN=rplF PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44 Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VP V + + G + KG LGEL+ + + +E + V + ++++ + GL RTL DNMVVGVS+GF K+L++ GVGYRAA++G+ L LSLGFSHPV +P+G++ VE+NT ITV GYDK +GQ A IR WRPPEPYKGKGV+YV E + R Sbjct: 2 SRIGKKPVVVPDGVDLKINGTVVTAKGKLGELTRQFHEAITFAQEGKEVNVAVSGTDKKSSSLWGLSRTLLDNMVVGVSQGFSKQLEIQGVGYRAAVKGRTLELSLGFSHPVNYELPNGLEATVEKNTLITVKGYDKEVLGQACAEIRSWRPPEPYKGKGVRYVGEFVLR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNS3 (50S ribosomal protein L6 OS=Synechococcus sp. (strain CC9311) GN=rplF PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44 Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI +P V +TL G + VKGP GEL P V V++ D+ + V T R + + HGL RTL NMV+GVS+G+ KKL++VGVG RA ++G+ LV+S G+SHPV + P+GI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPSGVSVNQVDNSIVVAPTSTKRSSRERHGLCRTLVANMVIGVSQGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEVVPPEGITFTVENNTNVTVSGTDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BRASB (50S ribosomal protein L6 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplF PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VPS VT T+ GQ +K+KGP G+L + +V V E+ +RV ET+RA ++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI + V + T ITV+G D +GQ AA IR +RPPEPYKGKGVKY E I R Sbjct: 2 SRIGKKPVTVPSGVTATVDGQTVKMKGPKGQLQFIVHDDVDVKFENGQVRVAPRSETKRARSLYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKNLQLALGYSHDVVYQIPEGITIAVPKPTEITVTGIDPQRVGQVAAEIRAYRPPEPYKGKGVKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNY3 (50S ribosomal protein L6 OS=Synechocystis sp. (strain PCC 6803) GN=rplF PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44 Identity = 87/170 (51.18%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V++ + G L VKGP G L P +V V +E + V + E+R A + HGL RTL NMV GV++GFE++L++ GVGYRA +G L L++G+S PV MT+P GI+V VE NT++ VSG DK +G AA IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKRPIPLPAKVSVDIQGSHLSVKGPKGSLERQLPEKVIVAQEGETITVTRQDESRTARERHGLVRTLVANMVDGVAQGFERRLEIQGVGYRAQAQGNKLTLNVGYSKPVEMTMPQGIEVKVENNTQVIVSGIDKELLGNTAAKIRAVRPPEPYKGKGIRYQGEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROM9 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplF PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44 Identity = 91/170 (53.53%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ +P VT+ L G + VKGP GEL + P V D++D+ + V T + Q HGL R L NMV GV++GF KKL++VGVG RA ++G+ LV+S G+SHPV M PDGI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I R Sbjct: 2 SRIGKTPVLIPEKVTVDLDGLIVTVKGPKGELKRLMPEGVSFDKKDNTVVVSPTTNKIHSRQRHGLCRALIANMVEGVTQGFSKKLEIVGVGSRAQVKGKNLVVSAGYSHPVEMIPPDGITYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYHDERILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_ALHEH (50S ribosomal protein L6 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rplF PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44 Identity = 87/166 (52.41%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDE 515 SR+ K+P++VPS V + L GQD+KVKGP GEL+ V V++ D LRV+ ++ RRA + G R L +NMV GVS+GFE+KL++ GVGYRA ++G+ L L+LGFSHPV +P+GI + T I V G DK +G+ AA IR +RPPEPYKGKGV+Y DE Sbjct: 2 SRVAKRPVKVPSGVEVKLDGQDVKVKGPKGELAWTVHDWVAVEQADGELRVQAQLDDRRAVALAGTTRALLNNMVTGVSQGFERKLELRGVGYRAQVQGKNLNLTLGFSHPVDYPVPEGITIEAPSQTEIVVKGADKQQVGEVAAQIRAFRPPEPYKGKGVRYADE 167
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOPT (50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA ++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI + V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I R Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGAVKVAPRHETNRARALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKKLQLALGYSHDVLYDIPEGITITVPKPTEINVVGIDPQKVGQVAAEIRDYRPPEPYKGKGVRYADEFIFR 171 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |