EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOPA (50S ribosomal protein L6 OS=Rhodopseudomonas palustris GN=rplF PE=1 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA ++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI + V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I R Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGAVKVAPRHETNRARALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKKLQLALGYSHDVLYDIPEGITITVPKPTEINVVGIDPQKVGQVAAEIRDYRPPEPYKGKGVRYADEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROM4 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 91/170 (53.53%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGKQPI VP V + L G L VKGP GELS P V + + D+ + V R++ + HGL R+L NMV GVSKG+ KKL++VGVG RA ++G+ L++S G+SHPV + PDGI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKQPIPVPEKVAVELDGLSLTVKGPKGELSRTLPEGVSISQVDNSIVVSAINSKRKSRERHGLSRSLVANMVEGVSKGYSKKLEIVGVGSRAQVKGKNLIVSAGYSHPVEVIPPDGITFVVENNTNVTVSGIDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_OLICO (50S ribosomal protein L6 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ + S VT + GQ +KVKGP G S +V V+ +D+ +RV ET+RA ++G R N+V GV+KGFEKKL++ GVGYRAAL+G+ L LSLG+SH V +P+GI + V + T ITV+G D +GQ AA IR +RPPEPYKGKGVKY +E I R Sbjct: 2 SRVGKRPVAIASGVTANVEGQTVKVKGPKGTRSFTVHDDVSVELKDNVIRVAPRFETKRAQSLYGTARAQIANLVEGVTKGFEKKLEITGVGYRAALQGKNLQLSLGYSHDVVYPVPEGITITVPKPTEITVAGIDSQRVGQVAAEIRGYRPPEPYKGKGVKYANEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_METSB (50S ribosomal protein L6 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ +PS VT + GQ + VKG G+LS P +V V D + V ET+RA M G+ R++ +N+VVGVSKGFE+KL++ GVGY+AA+ G+ L LSLGFSH V IPDGI + + T + +SG DK +GQ A+ IR RPPEPYKGKGVKY E I R Sbjct: 2 SRIGKKPVAIPSGVTANVDGQLISVKGGKGQLSFAAPEDVTVVLGDGGIEVSPRNETKRARAMWGMTRSMVNNLVVGVSKGFERKLEITGVGYKAAVSGKNLQLSLGFSHDVTFPIPDGISIVAAKPTEVAISGIDKRQVGQIASEIRALRPPEPYKGKGVKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BRASO (50S ribosomal protein L6 OS=Bradyrhizobium sp. (strain ORS278) GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VPS VT T+ GQ +K+KGP G+L + +V+V E+ ++V ET+RA ++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI + V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY E I R Sbjct: 2 SRIGKKPVTVPSGVTATVDGQTVKMKGPKGQLQFLVHDDVEVKFENGQVKVAPRAETKRARSLYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKNLQLALGYSHDVVYQIPEGITIAVPKPTEITITGIDPQRVGQVAAEIRAYRPPEPYKGKGVKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BACHD (50S ribosomal protein L6 OS=Bacillus halodurans GN=rplF PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG +P+E+PS VT+T+ G D+ VKGP GEL + E+ V ED+ + V + + + +HG R+L NMV GVSKGFEK L++VGVGYRA GQ LVL++G+SHPV + GI++ V NT++TV G DK +G A++IR R PEPYKGKG++Y E +RR Sbjct: 2 SRIGNKPVEIPSGVTVTVNGADVTVKGPKGELKRTFNPEIVVKVEDNTVVVERPSDKKEHRALHGTTRSLISNMVEGVSKGFEKSLELVGVGYRAQKSGQKLVLNVGYSHPVEIVPEKGIEIEVPSNTKVTVKGIDKERVGAVASNIRSVRLPEPYKGKGIRYEGEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THICR (50S ribosomal protein L6 OS=Thiomicrospira crunogena (strain XCL-2) GN=rplF PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43 Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRI K PI +PS V +T+ G D+ VKG G LS + V V ED + V E++ A G R++ +NMV+GV++GFEKKLQ+VGVGYRA +G+VL L+LGFSHPV +P+G+ V T I V G DK +GQ AA IR +RPPEPYKGKGVKY DE I R Sbjct: 2 SRIAKSPITLPSGVDVTINGTDVSVKGSKGALSKTFNHAVSVSLEDGVVTVAPKNESKNAWAQAGTARSIINNMVLGVTEGFEKKLQLVGVGYRAQAQGKVLNLTLGFSHPVNHELPEGVTVETPSQTEIVVKGADKQVVGQVAAEIRGYRPPEPYKGKGVKYADEYILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROM5 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplF PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43 Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+++P V++ + G + VKGP GEL + P V ++++ + V + R + + HGL RTL NMV GV+ G+ KKL++VGVG RA ++G+ LV+S G+SHPV MT PDGI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I R Sbjct: 2 SRIGKSPVQIPDKVSVDINGLTITVKGPKGELKRLMPEGVDFVQKENQIVVTPSTTKRYSRERHGLCRTLISNMVQGVTDGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEMTPPDGITYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYQDERIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_COLP3 (50S ribosomal protein L6 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=rplF PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43 Identity = 89/170 (52.35%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+ K P+ VP+ VTITL GQD+ VKGP+GELS +V V +E++ + + + A G R L +NMV GVSKGFEKKL + GVGYRA G+ L LSLGFSHP++ IP+GI T +T+ G DK +GQ AA+IR +R PEPYKGKGV+YVDE +RR Sbjct: 2 SRVAKAPVVVPAGVTITLSGQDITVKGPIGELSRTIHSDVVVSQEENNIITNIVADVKGAWAQAGTTRALINNMVEGVSKGFEKKLVLQGVGYRAKAAGKSLDLSLGFSHPIKHAIPEGITCETPSQTEVTLKGCDKHLVGQTAANIRAYRKPEPYKGKGVRYVDEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RK6_ODOSI (50S ribosomal protein L6, chloroplastic OS=Odontella sinensis GN=rpl6 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43 Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI++P+NV IT G DL VKG G L P + ++ D L V TR +HGL+RTL +NMV GVS+ F+ L + GVGYRA+++G ++L+LG+SHPV + IP+GI V V +NT I + DK +G FA++IR WRPPEPYKGKG+ Y E+++R Sbjct: 2 SRIGKLPIKIPANVDITCSGPDLTVKGKFGTLHNTIPDAIGIEEIDGSLIVNVKDNTRSNRALHGLYRTLINNMVTGVSEQFQLTLNLQGVGYRASVQGNSIILNLGYSHPVELVIPEGISVEVVQNTTINLKACDKGNLGLFASNIRSWRPPEPYKGKGILYKGEIVKR 171 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |