EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_NOSP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.786e-50
Identity = 108/246 (43.90%), Postives = 149/246 (60.57%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKEALLI 747
            +FLQR YDQ++HDV +Q LPV F +DRAG+VG+DGPTH G +D+ ++ C+PN+V+MAP DEAEL  MV T       P   R+PRGNG G  L       PLEIGK  IL  GD V I+ YG++V   + AA +L    I  TV +ARF KPLDT+LI  LA +   +IT+EEG + GGFGS +   L  + IL   + ++   +PD  +DH  P +   E  L+   I+  VL    + + + ++
Sbjct:  394 TFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGSDGPTHQGMYDIAYLRCIPNIVIMAPKDEAELQRMVVTGVNHTSGPIAMRYPRGNGHGVPLMEEG-WEPLEIGKSEILRTGDDVLIVAYGTMVYPGMQAAEILSEHGIEATVINARFVKPLDTELILPLAKKIGRVITLEEGCIMGGFGSAIAEALMDADIL---VPVKRFGVPDVLVDHAEPNESKTELGLTSHQIAERVLQAFFKQQVSAVV 635          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.638e-50
Identity = 110/237 (46.41%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG+  GA        T L IGKG I   G  +A+L +G+      LAA +  ++ +  TV D RF KPLD DL++++A  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP +   +  L    + A + + L
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKGIAMLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxs PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.751e-50
Identity = 107/233 (45.92%), Postives = 151/233 (64.81%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM  +PNMV+MAPSDE E   M+ T    +D P+  R+PRG+  GA        T + IGKG I  +G ++AIL +G++     LA+++  ++ +  TVAD RF KPLD +L++QLA  H++L+TVEE ++ GG GS +   L L   L  P  +  + LPD +I HG+P + + E  L    I   +
Sbjct:  394 TFLQRGYDQMIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--KQVETMTAMPIGKGLIKRQGKKIAILNFGTL-----LASSLTAAEALDATVADMRFVKPLDVELVKQLAESHDMLVTVEENAIMGGAGSGI---LELLQTLKLPKPVLLIGLPDEFIKHGAPDEIISELGLDATGIQKQI 616          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHESH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.206e-50
Identity = 108/224 (48.21%), Postives = 147/224 (65.62%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXL 681
            +FLQRGYDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM  +PNMV+MAPSDE E   M+ T     + P+  R+PRG+  G   P   +   L IGKG I  +G +VAIL +G+++   + AA     + I  TVAD RF KPLD +L+++LA+ H++L+TVEE ++ GG GS V   L L   L  P+ +  + LPD +I HG+  + L E  L
Sbjct:  394 TFLQRGYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYREGPTAVRYPRGSATGE--PQVEEMQALPIGKGLIKRQGQKVAILNFGTLLADVLTAA-----ESIDATVADMRFVKPLDVELVKELASSHDLLVTVEENAIMGGAGSGV---LELLQQLKQPMPVLQIGLPDEFIKHGASGEILAELRL 607          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_VIBSL (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 112/245 (45.71%), Postives = 157/245 (64.08%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME------GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ++HDV +  LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E   M+ T       PS  R+PRGNG+G  +   ++ T LEIGKGRI+ E      G +VAIL +G+ ++  +  A+      I  TVAD RF KPLD  LI+QLA +H++L+T+EE ++ GG G+ V  FL    +L   + + ++ LPD++I  G+  +  EE  L  + I  ++   L +
Sbjct:  394 TFLQRGYDQLIHDVAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHQ-HTGPSAVRYPRGNGMGTEI--QSEFTALEIGKGRIVRESKKAKDGSKVAILSFGTFLESALQTADA-----IDATVADMRFVKPLDEALIKQLAADHDVLVTIEENAIAGGAGAGVIEFLMQEKLL---MPVLNLGLPDKFIAQGTQDELHEELGLDAKGIEKSISDYLAK 627          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEPW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 111/237 (46.84%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM  +PNMV+MAPSDE E   M+ T       P+  R+PRG+  GA        T L IGKG I  +G ++AIL +G+      LA +++ ++    TVAD RF KPLD DLI++LA  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HG+P + + E  L    I   +   L
Sbjct:  394 TFLQRGYDQLIHDVALQKLPVVFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYKAGPTAVRYPRGSATGA--KQVETMTALPIGKGLIKRQGQKIAILNFGT-----TLANSLVAAEAFDATVADMRFVKPLDVDLIKELAETHDVLVTVEENAIMGGAGSGV---LELLQTLKLPKPVLQIGLPDEFIKHGAPDEIISELRLDAAGIEKQIADYL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEB8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS185) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 110/237 (46.41%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG   GA        T L IGKG I   G R+AIL +G++     LA+ +  ++ +  TV D RF KPLD DL++++A  HE+L+TVEE ++ GG G+ V   L     L  P  +  + LPD +I HGSP +   +  L    I A + + L
Sbjct:  394 TFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGTL-----LASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEB2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS223) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 110/237 (46.41%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG   GA        T L IGKG I   G R+AIL +G++     LA+ +  ++ +  TV D RF KPLD DL++++A  HE+L+TVEE ++ GG G+ V   L     L  P  +  + LPD +I HGSP +   +  L    I A + + L
Sbjct:  394 TFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGTL-----LASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_NITMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 108/224 (48.21%), Postives = 147/224 (65.62%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXL 681
            +FLQR YDQ++HDV +Q LPV FA+DRAGLVGADGPTH G+FD+T++ C+PN+ VMAPSDE E   M+ TA  + + P+  R+PRG+G G       +  PL  G+G I  EG  +A+L +GS++Q C+ AA     ++++ TVA+ RF KPLD DL+  LA  HE+L+TVEE +V GG GS V   L+  G     L+L    LPD ++D G P+  L E  L
Sbjct:  387 TFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVMAPSDENECRQMLYTAFQM-NTPAAVRYPRGSGSGVAQQKEMQMLPL--GRGEIRREGAEIALLAFGSMLQPCLEAA-----EELNATVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGSAVLESLSARGRTVPVLQLG---LPDTFLDQGDPSQMLSECGL 599          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHESW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain W3-18-1) GN=dxs PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.058e-49
Identity = 110/237 (46.41%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    +  PS  R+PRG+  GA        T L IGKG I   G R+A+L +G+      LA+ +  + ++  TV D RF KPLD +L+ ++A  H+IL+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP +   +  L    I A + + L
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYNAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRVGKRIALLNFGT-----TLASALTAADNLDATVVDMRFVKPLDAELVTEMAQTHDILVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYL 620          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_NOSP72.786e-5043.901-deoxy-D-xylulose-5-phosphate synthase OS=Nostoc ... [more]
DXS_SHESA3.638e-5046.411-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHEPA4.751e-5045.921-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHESH6.206e-5048.211-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_VIBSL8.105e-5045.711-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio ... [more]
DXS_SHEPW8.105e-5046.841-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHEB88.105e-5046.411-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHEB28.105e-5046.411-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_NITMU8.105e-5048.211-deoxy-D-xylulose-5-phosphate synthase OS=Nitroso... [more]
DXS_SHESW1.058e-4946.411-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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