EY710979

Overview
NameEY710979
Unique NameEY710979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710979 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11
Identity = 62/186 (33.33%), Postives = 78/186 (41.94%), Query Frame = 2
Query:  170 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXE----------------SIYGEKFPDENF---KLKHTGPGLLSMAN--------------AGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS------GMDVVYKVEAEGRQNGTPKSKVV 610
            G + + LF +AVPKTAENF ALC              Y  + FHR+IP FM+Q            +                SIY     ++      L+H   G+LSMA+               GP  NGSQFFIT      LDG   VFGKVL+      G DV+ K+E +       K KVV
Sbjct:   10 GDLKVELFCEAVPKTAENFIALCAAGA----------YNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLE-KANVKTDKKGKVV 184          
BLAST of EY710979 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 46/141 (32.62%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  170 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENF--------KLKHTGPGLLSMANAGPDTNGSQFFITT-VTTSWLDGRHVVFGKVLSGMDVVYKV 565
            G +V+ L+ +  P+   NF  LC          K  +Y     H +   F++Q            ESI+G+ + D+          ++KH   G +SM N G D +GSQF ITT     +LDG H VFG+V  GMD+V K+
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKI 139          
The following BLAST results are available for this feature:
BLAST of EY710979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
PPIL3_EMENI1.553e-1133.33Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPIL4_MOUSE7.709e-1132.62Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-C11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710979 ID=EY710979; Name=EY710979; organism=Citrus sinensis; type=EST; length=924bp
AACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCCACTCACGATGC
TATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAAA
TCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTACTTTGACGTTGA
GATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCTCTTTGGAAAGG
CAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAAA
GGGATTGGCAAGAGTGGGAAGCCACTCCACTACAAGGGAAGTACGTTTCA
TAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGTG
ATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAAT
TTCAAACTGAAGCACACCGGCCCAGGGCTTTTGTCAATGGCAAATGCTGG
GCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTGACAACTAGCT
GGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATCGGGGATGGAT
GTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGAG
CAAAGTCGTCATTGCAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCAT
AATTATATAATTACGCTATACACCTTTTTAATCCTCTCGTCTTTTCAACC
TTCATGAAGATACTCTTAATTTGCCTATTTATCATGTAATAGACATTTTA
AAATGTCCTANNGTGTTNGCCAAGNTGGTGCTTTCATTTAAGGGGATCCT
TTTCTCTGATAGCTATCTCATCACATTTAGTGTTTCTTTTCTAAACTGTG
TAGAAGAGCTTATGGAAGCACCCGAATAAGTACCGAAAAAAAAAAAAAAA
AGGGCGGCGCTCTAGAGATCCAAG
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