EY710929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA A P++Q+ +LGE L+PL+ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 556 ASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 624
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA+A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 615
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA+A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 615
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA+A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 615
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14 Identity = 64/173 (36.99%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 110 GPMQQAQQ-----PIPLMQPRMLPRGRIY-----RYPPGCNIPDVPVAGVP---------GGMLPGPYDIGGMPFRDAAFSQP---MQTGAL-ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPS 559 GP QQ P+ MQ +P G Y ++ G VP G P GG+ G G R A QP G L A AL+ A P+QQ+ +LGE LYP + + + A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V + ++ P+ Sbjct: 542 GPNQQIPPNFQGLPMGAMQGPGIPNGMGYPMVQGQFGGGRGRGQVPGMGGPMRGGYGGGRGGVPLGGQMRPGQGGRGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEMDNTELLGLLEDDEALRAKVDEALSVYDEYMKNKSDEPA 714
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14 Identity = 38/77 (49.35%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQAT 550 AS LA+A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+L++LESPE+L++KV EA+ VL+ ++AT Sbjct: 542 ASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEAT 618
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14 Identity = 36/69 (52.17%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA A P++Q+ +LGE +YP++ ++ A K+TGMLLE+D +E+LH+LESPE+L +KV EA+ VL+ Sbjct: 544 ASLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQ 612
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 545 ASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 613
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 320 ASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 526 AS LA A P++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+ Sbjct: 545 ASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 613
BLAST of EY710929 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14 Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 110 GPMQQAQQPIPLMQPRMLPRGR-IYRYPPGCNIPDVPVAGVPGGMLPGPYDIGGMPFRDAAFSQPMQTGALASA--------LANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQ---ATGPSPT 565 GP + Q +P+ P+ +P G + +PP + + G G G + G R A + P+ G +A A +P+QQ+ +LGENL+P + L+ D A K+TGMLLEMD E+++LLE AL AKV EAM V + Q GP+PT Sbjct: 608 GPGGRGMQGMPV--PQGMPGGPGMAGFPPNGRPQNGNMGGRGGPGRGGNFAAG----RGAPPAGPLAAGGELNASSLLQSQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAALVAKVNEAMAVYDEYVKSQQGPGQGPAPT 765 The following BLAST results are available for this feature:
BLAST of EY710929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710929 ID=EY710929; Name=EY710929; organism=Citrus sinensis; type=EST; length=834bpback to top |