EY710888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_NOCFA (Isopentenyl-diphosphate Delta-isomerase OS=Nocardia farcinica GN=idi PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.282e-17 Identity = 59/164 (35.98%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 63 CHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWG--EHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWV 548 C + E LHRAFSV LF++ +LLQQR+ K FPL+W NTCC HP ES V AA +L +ELG+ A T +G Y+A +D G EHE D++L D + +P+P EVA ++V ++ +A E +PW+ Sbjct: 16 CPVAEAHRDPGKLHRAFSVLLFDTAGRVLLQQRAAVKTRFPLLWANTCCGHPAPGES---------VEAAAATRLAEELGVAA------GLTEVGVFRYRA-ADTATGRVEHEWDHVLIGTLDTTPHPDPAEVANLRWVRPAEV-----RAKLAAEPAAYTPWL 158
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 27 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKE 494 +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+G AE V FT Y+A G EHE D++ + D P+E + + + +QL + Sbjct: 11 DDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHIYVGLFDGKPQGAPEEAHSWSWTDIQQLTD 145
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_AZOSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Azoarcus sp. (strain EbN1) GN=idi1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16 Identity = 62/184 (33.70%), Postives = 88/184 (47.83%), Query Frame = 3 Query: 24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGI-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFL 572 END +G E K H LHRA S+F+F+S LLLQ+R+ +K +W+NTCCSHP RE AA+R+L +E+GI C DV +Y+A E+E D++ F D PNPDE ++K+V+ L +AD E S W+ +D + Sbjct: 10 ENDTEIGVEGKMIAHRSGS------LHRAISIFIFDSADRLLLQKRAASKYHSAGLWSNTCCSHPRPREE---------CARAARRRLREEMGIACELDVKFG-------FVYRAVLTNHLIENEFDHVFFGRHDGDPVPNPDEAEDWKWVDLAWL-----RADLNERPHAYSFWLEACIDRVI 166
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_PHOLL (Isopentenyl-diphosphate Delta-isomerase 2 OS=Photorhabdus luminescens subsp. laumondii GN=idi2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15 Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 45 HENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKA 509 H+N I +LHRAFS+F+F++K LLLQ+R+ TK +WTN+CC HP R E +E AA R+L +E+G D P+ + + +Y A E+E D++ D N DEV++YK+VN +L+ L+ A Sbjct: 11 HDNPIGSAGKADIHQKGMLHRAFSIFVFDNKGNLLLQKRAATKYHSAGLWTNSCCGHP--RVGEALEA-------AAHRRLGEEMGF---DCPLKK---VSSFIYHAILPNNLIEYEYDHVFIGRFDKEPIINLDEVSDYKWVNLLKLRALINNA 150
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_PHOLL (Isopentenyl-diphosphate Delta-isomerase 1 OS=Photorhabdus luminescens subsp. laumondii GN=idi1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14 Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3 Query: 24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELL 500 END VG NK + HL + + LHRAFS F+ NSK E+ +QQR+ +K+ +P W+N+ CSHP E + +A R+ +ELGI + P +F L + YK EHEL ++ + D NP EV+ ++N + ++E + Sbjct: 9 ENDNRVGCINKIDAHL-----NGDHLHRAFSCFIINSKNEVYIQQRAQSKLLWPGYWSNSYCSHPRPDEE---------ISHAVMRRAEEELGIVINEEP--KF--LYKFQYKEKYKDVGYEHELCHVFVVFTDTPPTENPKEVSAGFFINIKDVQEYI 149
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_VIBFM (Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain MJ11) GN=idi PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.883e-14 Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 72 MEKIES--LNLLHRAFSVFLFNSK---YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQLKELLR 503 MEK+E+ LLH AFSV L+ E LLQ+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++F LG +Y+A + EHE DY+L DVS NP+EV++ ++ + +++ L+ Sbjct: 18 MEKLEAHEKGLLHLAFSVLLYRETDLGKEFLLQKRAECKYHSKNKWSNTCCSHPRVNEN---------VEAAGTRRLNEEIGITG--VLPEQFVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQWWSEADIEKELK 156
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_VIBF1 (Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=idi PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.202e-13 Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 72 MEKIES--LNLLHRAFSVFLFNSK---YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQLKELLR 503 MEK+E+ LLH AFSV L+ E LLQ+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++F LG +Y+A + EHE DY+L DVS NP+EV++ ++ + +++ ++ Sbjct: 18 MEKLEAHEKGLLHLAFSVLLYRETDLGKEFLLQKRAECKYHSKNKWSNTCCSHPRVNEN---------VEVAGTRRLNEEIGITG--VLPEQFVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQWWSEADIEKEMK 156
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_AZOSE (Isopentenyl-diphosphate Delta-isomerase 2 OS=Azoarcus sp. (strain EbN1) GN=idi2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 3 Query: 24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRK 506 E+D VG K H LHRA S+F+F+S L+LQ+R+ K +W+NTCCSHP E +AA+R+L +E+G+ E F +Y+ EHE D++ F D NPDE ++K+V+ +L +RK Sbjct: 10 EHDNKVGFAGKMAAH------QRGALHRAISIFVFDSHSRLMLQRRAAGKYHSGGLWSNTCCSHPRPNEES---------ADAARRRLREEMGVDCELKKAFSF------VYRTKFGSGLIEHEFDHVFFGNHDGRPVLNPDEADDWKWVDLTELTVDVRK 149
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_HALHL (Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=idi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13 Identity = 60/180 (33.33%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 21 PENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVN---PNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVR 551 PE RV G E K H LH AF VF+FN + ELLLQ+R+ +K F +W+NTCC HP E GV AA+R+L +E G PV +FT Y A D G E +Y ++ + P+P E+ +++ L +AD + L+ +PW R Sbjct: 9 PEGQRV-GTEEKIRAHA-----DGGTLHLAFCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHPRPGE---------GVTEAAERRLGEEFGFVTRLHPVAQFT------YHA-EDHHTGLAEYEYAHVLIGRAPTDQPAPDPLEIGAWEWA-----APLRIQADTQQYPLRYTPWFR 161
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI_BURM1 (Isopentenyl-diphosphate Delta-isomerase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=idi PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.905e-13 Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 27 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKE 494 +DR +G K H LLHRAFS+F+F+S LLLQQR+ K +W+NTCC HP RE+ + +A +R+L +E+G E PVD ++Y+A + EHE ++ D +V P+ EVA +++++ L E Sbjct: 11 DDRPIGICEKMRAH------HEGLLHRAFSIFVFDSAGRLLLQQRALNKYHSGGLWSNTCCGHPRPREA---------LPDAVRRRLGEEMGFACELRPVD------ALVYRARFENDLIEHEFVHIHVGRFDGTVAPDFAEVAAWRWIDVPTLLE 145 The following BLAST results are available for this feature:
BLAST of EY710888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710888 ID=EY710888; Name=EY710888; organism=Citrus sinensis; type=EST; length=933bpback to top |