EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.211e-39
Identity = 99/203 (48.77%), Postives = 124/203 (61.08%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*K----NLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L+I PA +ALNGV MEL D AFPLL  V  + D + A    + A++VG  PRK GM+R D++  N  I+K    AL   A+ N KVLVV NPAN      +    +L  +       LD     + +     +T   VSD KNV IWGNHSS+QYPD++Q TVN
Sbjct:    4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGQDQPVILQLLEITPALKALNGVVMELRDGAFPLLADVITSDDPMVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALGAVASRNVKVLVVGNPANTNALIAQQNAPDLDPKCFTAMVRLDHN---RALSQLAEKTGAAVSDIKNVTIWGNHSSTQYPDLSQATVN 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.211e-39
Identity = 97/205 (47.32%), Postives = 120/205 (58.54%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVN 644
            P++VLVTGAA QI Y+L+ MIA G M G  QPVILH+LDIP  A+AL GV MEL D ++PLL+ V ATTD   A   +N+A++VG FPR  GM RKD++  NVSI+K    AL  +A+   KVLVV NPAN             P   F    R        M+      + +GTN       V +  NVIIWGNHS +Q PDVN
Sbjct:   61 PIKVLVTGAAGQIAYSLMFMIASGQMFGPHQPVILHLLDIPKMADALKGVVMELQDCSYPLLQSVVATTDIQTAFLHINVAILVGAFPRGPGMQRKDLLKVNVSIFKEQGEALNKYASRGVKVLVVGNPANTNALTALMKASDLPTSNFSALTRLDQNRAQSMIS-----EKVGTN-------VDNVHNVIIWGNHSQTQVPDVN 253          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38
Identity = 91/199 (45.73%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            K PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L+I PA EAL GV MEL D AFPL+ G+  +  A EA    +IA++VG  PR  GM+RKD++  N +I+ A   AL   A+ + KVLVV NPAN      +        RN+  + ++   + +     +T    ++ KN+IIWGNHS++QYPD+++  V
Sbjct:    2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEITPALEALKGVVMELEDCAFPLVSGITTSDKAEEAFKDADIALLVGARPRGPGMERKDLLEANAAIFSAQGKALNDAASRDVKVLVVGNPANTNSLIAQRNAPDLDPRNFTAMTRLDHNRAVAQLANKTGAHNTEIKNMIIWGNHSATQYPDISKTKV 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38
Identity = 92/206 (44.66%), Postives = 125/206 (60.68%), Query Frame = 3
Query:   54 LMAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*K----NLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            +  K PVRV VTGAA QI Y+L+  IA G MLG DQPVIL +L+I PA EALNGV MEL D AFPL+ G+  T DA  A    + A++VG  PR  GM+RKD++  N +I+ A   A+  +A+   KVLVV NPAN      +    ++  +       LD   +   +   + +T   V+D K ++IWGNHSS+QYPD++ C V+
Sbjct:    1 MFMKAPVRVAVTGAAGQISYSLLFRIASGDMLGKDQPVILQLLEITPALEALNGVIMELEDCAFPLVAGITGTDDANVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKAINDNASKGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRAMAQLANKLGKT---VNDVKKMLIWGNHSSTQYPDLHHCEVD 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 101/265 (38.11%), Postives = 144/265 (54.34%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGEN-LSMSLSGLCIVEWRFITTANN---VVLHHQLQKLPRVCCCNSALT--YPDWVL 821
            M+ E + VL+TGAA QI Y+L+  + +G M G DQ + LH+LDIP   ++L G+ ME+ D A+PL+     T D  EA TGV+ A++VG  PR++GM+R D++  N +I+K    AL  HA  N KVLVV NPAN      +   +     N+     LDQ  +   I     +    V D  NVIIWGNHSS+QYPD     +N +TG+  +S ++     ++  FI+T       V+    +KL        A+T    DWVL
Sbjct:    1 MSNEVINVLITGAAGQIAYSLIFNVCKGDMFGLDQRIKLHLLDIPQMVDSLKGIVMEIQDGAYPLIADTVITADVKEAFTGVHYAILVGAMPRREGMERADLLKANAAIFKVQGKALAEHANKNVKVLVVGNPANTNALIAQVSANGIPKENFTCLTRLDQNRAKSQIAL---KAGVNVKDVHNVIIWGNHSSTQYPDYRCGYINLSTGKTPISTAIKDEKWLQGEFISTVQKRGAAVI--AARKLSSAASAAKAITDHMHDWVL 260          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.285e-38
Identity = 97/225 (43.11%), Postives = 135/225 (60.00%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANP-MH*F*KN---LRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFI 725
            K P+RV VTGAA QI Y+L+  IA G MLG DQPVIL +LDIP +  +L GV MEL D AFPLL+ +  T D   A   +NIA++VG  PR +GM+RKD++  N +I++A   AL+  A  + KVLVV NPAN   +   KN   L+  S      LD   +   +   + +   PVS  + +I+WGNHSS+QYPD++   V+   G N +  ++ +  +E  FI
Sbjct:    2 KTPIRVAVTGAAGQIAYSLLFRIAAGDMLGEDQPVILQLLDIPQSLPSLKGVVMELDDCAFPLLRDITITDDPKTAFRDINIAMLVGARPRTKGMERKDLLEANGTIFRAQGKALDEVAGRDVKVLVVGNPANTNAYITMKNAPSLKPTSFSSMMRLDHNRAVFQLAVKVGQ---PVSSVRKMIVWGNHSSAQYPDLSHAEVD---GHNAADLVNDMAWIETGFI 220          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38
Identity = 94/200 (47.00%), Postives = 123/200 (61.50%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL  +  + D + A    + A++VG  PRK GM+R D++  N  I+K    AL   A+ + KVLVV NPAN       +N       +   + ++   + I     +T  PVS  KN+ IWGNHSS+QYPD++Q TVN
Sbjct:    8 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALAGVVMELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALNKVASRDVKVLVVGNPANTNALIAQQNAPDLDPKQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATVN 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38
Identity = 93/199 (46.73%), Postives = 122/199 (61.31%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D A+PLL  V  + D + A    + A++VG  PRK GM+R D++  N  I+K    AL   A+ + KVLVV NPAN      +        R +  + ++   + I     +T  PVS  KN+ IWGNHSS+QYPD++Q TV
Sbjct:    4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVVMELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGQALNQVASRDVKVLVVGNPANTNALIAQQNAPDLDPRQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATV 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_RALEH (Malate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=mdh PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38
Identity = 97/221 (43.89%), Postives = 125/221 (56.56%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            MAK P+RV VTGAA QIGY+L+  IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++  N  I+     AL+  A+ N KVLVV NPAN             P   F   LR   L  N  L QI +         +T  PVS  + + +WGNHS + Y D    TV+  + ++L
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQQAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPNLPRENFTAMLR---LDHNRALSQIAA---------KTGKPVSSIEKLFVWGNHSPTMYADYRYATVDGKSVKDL 209          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38
Identity = 97/221 (43.89%), Postives = 125/221 (56.56%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            MAK P+RV VTGAA QIGY+L+  IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++  N  I+     AL+  A+ N KVLVV NPAN             P   F   LR   L  N  L QI +         +T  PVS  + + +WGNHS + Y D    TV+  + ++L
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQQAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPNLPRENFTAMLR---LDHNRALSQIAA---------KTGKPVSSIEKLFVWGNHSPTMYADYRYATVDGQSVKDL 209          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_DEIRA1.211e-3948.77Malate dehydrogenase OS=Deinococcus radiodurans GN... [more]
MDHA_DICDI1.211e-3947.32Probable malate dehydrogenase 1 OS=Dictyostelium d... [more]
MDH_ALHEH1.339e-3845.73Malate dehydrogenase OS=Alkalilimnicola ehrlichei ... [more]
MDH_ALCBS1.339e-3844.66Malate dehydrogenase OS=Alcanivorax borkumensis (s... [more]
MDHC_DICDI1.749e-3838.11Probable malate dehydrogenase 3 OS=Dictyostelium d... [more]
MDH_NITMU2.285e-3843.11Malate dehydrogenase OS=Nitrosospira multiformis (... [more]
MDH_DEIGD2.984e-3847.00Malate dehydrogenase OS=Deinococcus geothermalis (... [more]
MDH_DEIDV6.647e-3846.73Malate dehydrogenase OS=Deinococcus deserti (strai... [more]
MDH_RALEH8.682e-3843.89Malate dehydrogenase OS=Ralstonia eutropha (strain... [more]
MDH_CUPTR8.682e-3843.89Malate dehydrogenase OS=Cupriavidus taiwanensis (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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