EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGVA---------VADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGVA---------VADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIBC (Malate dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGVA---------VADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIB5 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGVA---------VADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGVA---------VADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.297e-32
Identity = 79/197 (40.10%), Postives = 108/197 (54.82%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANP-MH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            PV V VTGAA QI Y L+  IA G MLG   P+ L +L+IP A  +L GV MEL D AFPLL  +D + D      G N+A++VG  PR  GM+R D+++ N  I+     A+   AA + KVLVV NPAN        N       R   + ++   + I     +T  P ++   + +WGNHS++QYPD+   TV
Sbjct:    9 PVTVTVTGAAGQIAYGLLFRIASGAMLGPHTPIRLRLLEIPAAVASLEGVAMELEDGAFPLLDAIDISDDPWTGFAGANVALLVGARPRTAGMERADLLAANGPIFTDQGQAINAVAADDVKVLVVGNPANTNAFIAMSNAPDVPAERFTAMTRLDHNRAIAQLAKKTGAPATEIHRIAVWGNHSATQYPDLTHATV 205          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_VEREI (Malate dehydrogenase OS=Verminephrobacter eiseniae (strain EF01-2) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.214e-31
Identity = 91/214 (42.52%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCT 653
            M K+PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L++P     +ALNGV MEL D AFPLL G+ A +D + A    + A++VG  PR  GM+R ++++ N +I+ A   AL   A+   KVLVV NPAN             P   F   LR   L  N  + QI +         +T   V+D + + +WGNHS + Y D    T
Sbjct:    1 MNKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPAEGPQKALNGVMMELDDCAFPLLAGMTAHSDPMAAFKDADYALLVGSRPRGPGMERAELLAVNGAIFIAQGKALNAVASRQVKVLVVGNPANTNAFIAMQSAPDLPRKNFTAMLR---LDHNRAVSQIAA---------KTGQAVADIEKLTVWGNHSPTMYADYRFAT 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.214e-31
Identity = 81/207 (39.13%), Postives = 116/207 (56.04%), Query Frame = 3
Query:   75 RVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            +V VTGAA QI Y+L+  IA G + GTD PV L +L+IP A     GV MEL+D+AFPLL+ +  T DA EA  G N A +VG  PR +G +R D+++ N  I+     A+  +AA + +VLVV NPAN             P   F   +R   L  N  + Q+ +  G G+         ++  N+++WGNHS++Q+PD+   TV
Sbjct:   11 KVTVTGAAGQISYSLLWRIANGEVFGTDTPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMR---LDHNRAISQLATKLGRGS---------AEFNNIVVWGNHSATQFPDITYATV 205          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ACIBS (Malate dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=mdh PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.214e-31
Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            K+PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+R D++  N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+    G+          V+D + + +WGNHS + Y D    T N   GE+L
Sbjct:    2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALTQVAQKAGV---------VVADIEKLTVWGNHSPTMYADYRFATAN---GESL 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.705e-31
Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLS 683
            P  V VTGAA  IGYA +  IA G MLG D P+ L +L+IPPA  A  G  MEL D+AFPLL  V+   D      G ++A+++G  PR +GM+R D+++ N  I+     A+   AA   +VLVV NPAN       N         +  L ++   + I      +   V D   V IWGNHSS+QYPD+    V   +G +++
Sbjct:    7 PAVVTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPPAVSAAEGTAMELDDSAFPLLLDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRAINQVAADGVRVLVVGNPANTNALVAANNAPDVPAERFTALTRLDHNRAIAQLARHSGAAVRDISRVTIWGNHSSTQYPDIFHARVGDRSGADIA 212          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_ACIBY7.118e-3242.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_ACIBT7.118e-3242.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_ACIBC7.118e-3242.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_ACIB57.118e-3242.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_ACIB37.118e-3242.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_NOCFA9.297e-3240.10Malate dehydrogenase OS=Nocardia farcinica GN=mdh ... [more]
MDH_VEREI1.214e-3142.52Malate dehydrogenase OS=Verminephrobacter eiseniae... [more]
MDH_CORGL1.214e-3139.13Malate dehydrogenase OS=Corynebacterium glutamicum... [more]
MDH_ACIBS1.214e-3142.08Malate dehydrogenase OS=Acinetobacter baumannii (s... [more]
MDH_RHOOB2.705e-3138.35Malate dehydrogenase OS=Rhodococcus opacus (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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