EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CHLTR (Malate dehydrogenase OS=Chlamydia trachomatis GN=mdh PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.366e-29
Identity = 75/205 (36.59%), Postives = 106/205 (51.71%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M  + V V VTG   QI Y+ +  +A G + G D  + L + DIP    AL+GV+MEL D AFPLL+ V  TT   +A  G++ A ++G  PR  GM+R+D++ KN  I+     AL   A  + K+ VV NP N       N   + L +N+     LDQ      +       E P+S    V++WGNHS+ Q PD  Q  +N
Sbjct:    1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIFATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSH---RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.641e-28
Identity = 81/199 (40.70%), Postives = 107/199 (53.77%), Query Frame = 3
Query:   72 VRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KN----------LRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPD 638
            V+V VTGAA QIGY+L+  IA G M GTD  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GM+R D++  N  I+     A+E +AA + +VLVV NP N       N               L  N    Q+ S  G+         PV +  ++ IWGNHSS+QYPD
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGV---------PVKEVTHLGIWGNHSSTQYPD 194          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.641e-28
Identity = 81/199 (40.70%), Postives = 107/199 (53.77%), Query Frame = 3
Query:   72 VRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KN----------LRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPD 638
            V+V VTGAA QIGY+L+  IA G M GTD  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GM+R D++  N  I+     A+E +AA + +VLVV NP N       N               L  N    Q+ S  G+         PV +  ++ IWGNHSS+QYPD
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGV---------PVKEVTHLGIWGNHSSTQYPD 194          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28
Identity = 81/226 (35.84%), Postives = 120/226 (53.10%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNYMLDQIGS------*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEW 716
            M +   ++ VTGAA QI Y+L+  IA G + G + PV L +L+IP A     GV MEL+D+AFPLLK +  T  A  A  G N A +VG  PR +G +R D+++ N  I+     AL  +AA + +VLVV NPAN        L  Q   ++   D+  +       +GI     +     +D +  ++WGNHS+ Q+PD+   T+    GE    ++SGL   +W
Sbjct:    1 MTESVKKIAVTGAAGQIAYSLLWRIANGDVYGKNTPVELQLLEIPQAIGGAEGVAMELLDSAFPLLKNIVVTDKAEVAFDGTNAAFLVGAKPRGKGEERADLLTANGKIFGPQGKALNDNAADDIRVLVVGNPANT-----NALIAQHAAKDIPADRFNAMMRLDHNRGIAQLSEKLGRDKNDIEKFVVWGNHSAGQFPDITYATIG---GE----AISGLVDHDW 214          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CHLTB (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=mdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M  + V V VTG   QI Y+ +  +A G + G D  + L + DIP    AL+GV+MEL D AFPLL+ V  TT   +A  G++ A ++G  PR  GM+R+D++ KN  I      AL   A  + K+ VV NP N       N   + L +N+     LDQ      +       E P+S    V++WGNHS+ Q PD  Q  +N
Sbjct:    1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIVATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSH---RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CHLTA (Malate dehydrogenase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=mdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28
Identity = 74/205 (36.10%), Postives = 106/205 (51.71%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M  + V V VTG   QI Y+ +  +A G + G D  + L + DIP    AL+GV+MEL D AFPLL+ V  TT   +A  G++ A ++G  PR  G++R+D++ KN  I+     AL   A  + K+ VV NP N       N   + L +N+     LDQ      +       E P+S    V++WGNHS+ Q PD  Q  +N
Sbjct:    1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGVERRDLLKKNGEIFATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSH---RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CHLT2 (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=mdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.143e-28
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M  + V V VTG   QI Y+ +  +A G + G D  + L + DIP    AL+GV+MEL D AFPLL+ V  TT   +A  G++ A ++G  PR  GM+R+D++ KN  I      AL   A  + K+ VV NP N       N   + L +N+     LDQ      +       E P+S    V++WGNHS+ Q PD  Q  +N
Sbjct:    1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIVATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSH---RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.145e-28
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 3
Query:   72 VRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPD 638
            V+V VTGAA QIGY+L+  IA G M G D  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GM+R D++  N  I+     A+E +AA + ++LVV NP N        N +  S  R + + ++   +       +   PV +  ++ IWGNHS++QYPD
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPD 194          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.145e-28
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 3
Query:   72 VRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPD 638
            V+V VTGAA QIGY+L+  IA G M G D  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GM+R D++  N  I+     A+E +AA + ++LVV NP N        N +  S  R + + ++   +       +   PV +  ++ IWGNHS++QYPD
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPD 194          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CHLCV (Malate dehydrogenase OS=Chlamydophila caviae GN=mdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.814e-27
Identity = 70/200 (35.00%), Postives = 105/200 (52.50%), Query Frame = 3
Query:   72 VRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY----MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            V V VTG   QI Y+ +  +A G + G+D  + L + D+P    AL+GV+MEL D A+PLL+ +  TT   +AC G++ A ++G  PR  GM+R D++ +N  I+    S L   A  + K+ VV NP N       N   +   RN+     LDQ      +       E P+ +  NV++WGNHS+ Q PD  Q  ++
Sbjct:    9 VSVAVTGGTGQIAYSFLFALAHGDVFGSDCSIDLRVYDLPGLERALSGVRMELDDCAYPLLQSLRVTTSLEDACDGIDAAFLIGAAPRGPGMERSDLLKRNGEIFSLQGSVLNVCAKRDAKIFVVGNPVNTNCWIAMNKAPKLNRRNFHSMLRLDQNRMHTMLAH---RAEVPLDEVTNVVVWGNHSAKQVPDFTQALIS 205          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_CHLTR7.366e-2936.59Malate dehydrogenase OS=Chlamydia trachomatis GN=m... [more]
MDH_LEPBL1.641e-2840.70Malate dehydrogenase OS=Leptospira borgpetersenii ... [more]
MDH_LEPBJ1.641e-2840.70Malate dehydrogenase OS=Leptospira borgpetersenii ... [more]
MDH_CORDI2.143e-2835.84Malate dehydrogenase OS=Corynebacterium diphtheria... [more]
MDH_CHLTB2.143e-2836.59Malate dehydrogenase OS=Chlamydia trachomatis (str... [more]
MDH_CHLTA2.143e-2836.10Malate dehydrogenase OS=Chlamydia trachomatis (str... [more]
MDH_CHLT22.143e-2836.59Malate dehydrogenase OS=Chlamydia trachomatis (str... [more]
MDH_LEPIN8.145e-2839.47Malate dehydrogenase OS=Leptospira interrogans GN=... [more]
MDH_LEPIC8.145e-2839.47Malate dehydrogenase OS=Leptospira interrogans ser... [more]
MDH_CHLCV1.814e-2735.00Malate dehydrogenase OS=Chlamydophila caviae GN=md... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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