EY710829

Overview
NameEY710829
Unique NameEY710829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.123e-19
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRPTI+R  MP+  P  K +    E PE   + T  +Q Q IL ++ +++LS HS DE +LG+   P W  DP    AFK+FS +L+E+E  +   N D  L NR G    PY L+ P
Sbjct:  719 YAGYLPNRPTISRRPMPE--PGSKEYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFP 840          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 1
Query:    4 AAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            A Y PNRPTI+R  MP E+  E  ++   + P+   L T   Q Q +L I+ +++LSTHS DE +LG+     W  +     AF+KF  ++ E+E  IDERN D TL NR G   +PY LL P
Sbjct:  722 AGYLPNRPTISRQYMPKENTPE--FEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFP 842          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.033e-19
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPED----ALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA + PNRPT++R  MP E  TE++ K  +E+  D      ++T  +Q Q IL I+ +++LS HS DE +LG+   P W  D     AFK+F  RL+++E  I + NG+S L NRNG   +PY LL P
Sbjct:  729 YAGFLPNRPTVSRRPMP-EPGTEEYAK--LERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYP 853          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19
Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPA-WGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  Y PNRP + R  +PDE   E  + +FI  PE     + P+  Q    +A +D LSTHSPDEE++G+ ++P+ W  D  I  AF  F+  +  +E  I++RN D    NR GAGV+PY LL P
Sbjct:  780 YGGYVPNRPPLMRRLIPDESDPE--YASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVP 902          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.046e-18
Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRPT++R  MP+    E  ++   + P+ A L T   Q Q +L ++ +++LS H+ DE +LG+ + P W +D    AAF++F  +L ++E  I +RNG++ L NR G    PY LL P
Sbjct:  722 YAGYLPNRPTVSRKFMPEPGTPE--YEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFP 843          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.672e-18
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRPT++R  MP+    E  ++     P+ A L T   Q Q +L ++ +++LS H+ DE +LG+ + P W +D    AAF +F  +L ++E  I +RNGD+ L NR+G    PY LL P
Sbjct:  723 YAGYLPNRPTVSRRFMPEPGTPE--YEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFP 844          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17
Identity = 50/124 (40.32%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRP+++R  MP+  P  K +      PE   + T   Q QAI+ I+ L++LS HS DE +LG+   P W  D     AFK+F  RL E+E  +   N D    NR G    PY LL P
Sbjct:  726 YAGYLPNRPSVSRRPMPE--PGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYP 847          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 1
Query:   10 YFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPA---WGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y PNRP + R  +PD +     +  F+  P    L   P   +A   +A +D LSTHSPDEE+LG+G++     W  D    AA   F+  +   E  I+ RN D    NR GAGV+PY LL P
Sbjct:  778 YVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAP 901          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.267e-16
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   10 YFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y PNRP + R  +P E   E  +   +  P    L   P+  Q    +  +D LSTHS DEE+LG+  + AW  DP   AA ++F+  +   E  I+ RN D +  NR GAGV+PY L+ P
Sbjct:  764 YIPNRPPLMRRLVPAEGDPE--YAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAP 882          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y     NRPT++R  MP++   E  ++  ++ P+ A L T   + Q ++ ++ +++LS H+ DE +LG+   P W  D     AFKKF  +L E+E  + +RN D  L NR+G   +PY LL P
Sbjct:  723 YGGLILNRPTLSRRFMPEKGSAE--FEELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYP 844          
The following BLAST results are available for this feature:
BLAST of EY710829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_ORYSJ4.123e-1941.94Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_ARATH5.385e-1942.28Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOX4_ORYSJ7.033e-1942.19Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOX3_ARATH9.185e-1941.60Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOXA_SOLLC2.046e-1838.71Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_SOLTU2.672e-1839.52Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOX2_ORYSJ6.583e-1740.32Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX6_ORYSJ3.267e-1638.71Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX5_ORYSJ4.267e-1638.02Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX3_PEA5.572e-1635.48Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710829 ID=EY710829; Name=EY710829; organism=Citrus sinensis; type=EST; length=868bp
TATGCAGCCTACTTCCCCAACCGGCCAACAATTGCAAGAGTAAACATGCC
AGATGAAGATCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTG
AAGATGCACTTTTGTACACCTTCCCCAATCAGGATCAAGCCATTCTAGTT
ATAGCCACCCTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTT
AGGGAAAGGTAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTG
CATTCAAGAAGTTTAGTGGCAGGTTGATGGAGCTTGAAGGAATTATTGAT
GAAAGGAATGGAGATAGCACTTTGGTGAATAGAAATGGAGCTGGGGTTGT
TCCATATAATCTCTTGAAGCCCTATTGGAAAAGATGGAGACAAAAGAGAA
AGGAGTTCCATACAGCATCTCTAATCTAGACTCGCTGAAGTCCGGGTCTT
TGTGCCAAAAATTTCGAATGCATGCATTGGGGTTCGTCAACTTTTAGTAA
GCATTGTATCTTTTTTTTTACCCTGGAAAAAAATGGACAACGAACCTCCT
TTTAAAATGGTTATTTTTAAAAAAAAAATTGACCGGCCCTCCCCAAGGGT
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGGCGCTCTGAAAGG
GATCCAAGCTTAAATACGCGGGGAGTGCGGGCACCAAAAGTCTTCCATAA
GGGGCACCTAAATTCAATTACCGGGGCCGACCTTTTTAAAAGACGGAGAC
GGGGGAAAAACCCAGGGGTTTAACCCAAATTAATACCCCTTTAGAGAAAA
TTTCCCCCATTTTCCCAAAAAGGGGGAAAAAAAAAAAAAAAAACACGCAC
CAAACACACGCCCTTCCC
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