EY710829

Overview
NameEY710829
Unique NameEY710829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y     NRPT++R  MP++   E  ++   + P+ A L T   + Q ++ ++ +++LS H+ DE +LG+   P W  D     AFK+F  +L ++E  + ERN D  L NR G   +PY LL P
Sbjct:  719 YGGLILNRPTLSRRFMPEKGSAE--YEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLP 840          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA + PNRPT++R  MP+    E  +    E  + A L T   Q Q +L I+ +++LS HS DE +LG+   P W  D     AFK+F   L  +E  I  RN D    NR G   +PY LL P
Sbjct:  743 YAGFLPNRPTVSRRFMPEPGTDE--YAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYP 864          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLL 366
            Y     NRPT+AR  +P E   E  +   ++ P+ A L T   + + ++ ++ +++LS H+ DE +LG+ + P W  D     AFK+F  +L  +EG I+ RN D +L NR G   +PY LL
Sbjct:  726 YGGLILNRPTLARRFIPAEGTPE--YDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL 845          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.993e-14
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y     NRPT++R  +P+E   E  +   ++  + A L T   + Q ++ ++ +++LS H+ DE +LG+ + P W  D     AF+KF  +L E+E  +  +N D +L +R G   +PY LL P
Sbjct:  726 YGGLILNRPTLSRRLLPEEGTAE--YDEMVKSSQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHP 847          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  +  NRPTI R  +P+  P  K +       + A L T   + +AI+ ++ +++LS H+ DE +LG+   P W  +     AFK+F  +L E+E  I  RN DS+L NRNG   +PY +L P
Sbjct:  723 YGGFILNRPTITRRLLPE--PGTKEYGELTSNYQKAYLRTITGKVEAIVDLSVIEILSRHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLP 844          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 40/124 (32.26%), Postives = 69/124 (55.65%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  +  NRPT +R  +P++   E  ++  ++  + A L T  ++ Q ++ ++ +++LS H+ DE +LG+   P W  D     AF+KF  +L E+E  +  +N D +L NR G   +PY LL P
Sbjct:  728 YGGFILNRPTSSRRLLPEKGTPE--YEEMVKSHQKAYLRTITSKFQTLVDLSVIEILSRHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHP 849          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKE-PAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  Y  NRPT +R  MP++   E  +    +  E A L T   ++  +  +  +++LS H+ DE++LG+  E   W  D V   AFK+F  +L E+E  + +RN D +L NR G   +PY LL P
Sbjct:  727 YGGYILNRPTKSRKFMPEKGTPE--YDDLAKNYEKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYP 849          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.836e-13
Identity = 42/125 (33.60%), Postives = 65/125 (52.00%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLG-KGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y     NRPTI+R  MP++   E  +    + PE   L T   + + ++ +  +++LS H+ DE +LG +     W  D     AFK+F  +L E+E  + ++N D TL NR G   +PY LL P
Sbjct:  608 YGGLILNRPTISRRFMPEKGSAE--YAALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYP 730          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.836e-13
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKP 372
            Y     NRPT +R  +P++   E  ++  I   E A L T  ++   ++ ++ +++LSTH+ DE +LG+   P W  D     AF+KF  +L E+E  +  RN D +L  NR G   +PY LL P
Sbjct:  700 YGGLIMNRPTASRRLLPEKGTPE--YEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP 822          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLG-KGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y     NRPTI+R  MP++   E  +    + PE   L T   + + ++ +  +++LS H+ DE +LG +     W  D     AFK+F  +L E+E  + E+N D TL NR G   +PY LL P
Sbjct:  714 YGGLILNRPTISRRFMPEKGSPE--YDALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYP 836          
The following BLAST results are available for this feature:
BLAST of EY710829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX3_SOYBN4.717e-1534.68Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOX5_ARATH6.161e-1538.71Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOXX_SOYBN1.051e-1435.25Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV... [more]
LOX2_PEA3.993e-1432.26Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOXA_PHAVU5.216e-1436.29Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOX2_SOYBN6.812e-1432.26Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX1_LENCU7.531e-1335.20Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOXB_PHAVU9.836e-1333.60Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2... [more]
LOX1_SOYBN9.836e-1334.40Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 ... [more]
LOX4_SOYBN2.191e-1234.40Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710829 ID=EY710829; Name=EY710829; organism=Citrus sinensis; type=EST; length=868bp
TATGCAGCCTACTTCCCCAACCGGCCAACAATTGCAAGAGTAAACATGCC
AGATGAAGATCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTG
AAGATGCACTTTTGTACACCTTCCCCAATCAGGATCAAGCCATTCTAGTT
ATAGCCACCCTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTT
AGGGAAAGGTAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTG
CATTCAAGAAGTTTAGTGGCAGGTTGATGGAGCTTGAAGGAATTATTGAT
GAAAGGAATGGAGATAGCACTTTGGTGAATAGAAATGGAGCTGGGGTTGT
TCCATATAATCTCTTGAAGCCCTATTGGAAAAGATGGAGACAAAAGAGAA
AGGAGTTCCATACAGCATCTCTAATCTAGACTCGCTGAAGTCCGGGTCTT
TGTGCCAAAAATTTCGAATGCATGCATTGGGGTTCGTCAACTTTTAGTAA
GCATTGTATCTTTTTTTTTACCCTGGAAAAAAATGGACAACGAACCTCCT
TTTAAAATGGTTATTTTTAAAAAAAAAATTGACCGGCCCTCCCCAAGGGT
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGGCGCTCTGAAAGG
GATCCAAGCTTAAATACGCGGGGAGTGCGGGCACCAAAAGTCTTCCATAA
GGGGCACCTAAATTCAATTACCGGGGCCGACCTTTTTAAAAGACGGAGAC
GGGGGAAAAACCCAGGGGTTTAACCCAAATTAATACCCCTTTAGAGAAAA
TTTCCCCCATTTTCCCAAAAAGGGGGAAAAAAAAAAAAAAAAACACGCAC
CAAACACACGCCCTTCCC
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