EY710829

Overview
NameEY710829
Unique NameEY710829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1 
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRPT++   MP+    E  ++     P+   L TF  Q Q++L I+  ++ S H+ DE +LG+     W +D     AF++F   L ++E  I   N   +  NR+G   VPY LL P
Sbjct:  721 YAGYLPNRPTLSCNLMPEPGSVE--YEELKTNPDKVFLKTFVPQLQSLLEISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFP 842
The following BLAST results are available for this feature:
BLAST of EY710829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXB_SOLLC4.882e-1234.68Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710829 ID=EY710829; Name=EY710829; organism=Citrus sinensis; type=EST; length=868bp
TATGCAGCCTACTTCCCCAACCGGCCAACAATTGCAAGAGTAAACATGCC
AGATGAAGATCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTG
AAGATGCACTTTTGTACACCTTCCCCAATCAGGATCAAGCCATTCTAGTT
ATAGCCACCCTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTT
AGGGAAAGGTAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTG
CATTCAAGAAGTTTAGTGGCAGGTTGATGGAGCTTGAAGGAATTATTGAT
GAAAGGAATGGAGATAGCACTTTGGTGAATAGAAATGGAGCTGGGGTTGT
TCCATATAATCTCTTGAAGCCCTATTGGAAAAGATGGAGACAAAAGAGAA
AGGAGTTCCATACAGCATCTCTAATCTAGACTCGCTGAAGTCCGGGTCTT
TGTGCCAAAAATTTCGAATGCATGCATTGGGGTTCGTCAACTTTTAGTAA
GCATTGTATCTTTTTTTTTACCCTGGAAAAAAATGGACAACGAACCTCCT
TTTAAAATGGTTATTTTTAAAAAAAAAATTGACCGGCCCTCCCCAAGGGT
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGGCGCTCTGAAAGG
GATCCAAGCTTAAATACGCGGGGAGTGCGGGCACCAAAAGTCTTCCATAA
GGGGCACCTAAATTCAATTACCGGGGCCGACCTTTTTAAAAGACGGAGAC
GGGGGAAAAACCCAGGGGTTTAACCCAAATTAATACCCCTTTAGAGAAAA
TTTCCCCCATTTTCCCAAAAAGGGGGAAAAAAAAAAAAAAAAACACGCAC
CAAACACACGCCCTTCCC
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