EY686123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_SYNEN (Photosystem I reaction center subunit II OS=Synechococcus elongatus naegeli GN=psaD PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.238e-28 Identity = 50/81 (61.73%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 233 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-----RLRSKYKIKYQFYP 460 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL R + YKI Y+ +P Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKI-YRIFP 88 HSP 2 Score: 48.1358 bits (113), Expect = 1.238e-28 Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 3 Query: 459 RVFPNGEVQYLHPQDGVYPDKVHPETEGVGQK*RPIGNNVRHIEAKLQGGK 611 R+FP+GE +HP+DGV+P+KV+ E V R IG N + K G K Sbjct: 85 RIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKK 135
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_ANAVT (Photosystem I reaction center subunit II OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaD PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 2.937e-27 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 230 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFY 457 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ Y Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIY 84 HSP 2 Score: 47.7506 bits (112), Expect = 2.937e-27 Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 3 Query: 459 RVFPNGEVQYLHPQDGVYPDKVHPETEGVGQK*RPIGNNVRHIEAKLQG 605 R+ P+GE ++HP DGV+P+KV+P E V R IG N + K G Sbjct: 85 RILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPSQVKFSG 133
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_FREDI (Photosystem I reaction center subunit II OS=Fremyella diplosiphon GN=psaD PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.422e-26 Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 2 Query: 230 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFY 457 +P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M++G NLL LARKE +ALG +LR K+KI Y+ Y Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIALGGQLR-KFKITDYKIY 83 HSP 2 Score: 40.0466 bits (92), Expect = 2.422e-26 Identity = 20/49 (40.82%), Postives = 25/49 (51.02%), Query Frame = 3 Query: 459 RVFPNGEVQYLHPQDGVYPDKVHPETEGVGQK*RPIGNNVRHIEAKLQG 605 R+ P GE +HP DGV+P+KV+ E V R IG N K G Sbjct: 84 RILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPSAIKFSG 132
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_ANASP (Photosystem I reaction center subunit II OS=Anabaena sp. (strain PCC 7120) GN=psaD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.422e-26 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 230 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFY 457 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ Y Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIY 84 HSP 2 Score: 44.669 bits (104), Expect = 2.422e-26 Identity = 20/49 (40.82%), Postives = 28/49 (57.14%), Query Frame = 3 Query: 459 RVFPNGEVQYLHPQDGVYPDKVHPETEGVGQK*RPIGNNVRHIEAKLQG 605 R+ P+GE ++HP DGV+P+KV+ E V R IG N + K G Sbjct: 85 RILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPSQVKFSG 133
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_GUITH (Photosystem I reaction center subunit II OS=Guillardia theta GN=psaD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.909e-25 Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 2 Query: 212 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK----YQFYPS 463 L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LARKEQCLALGT++++ +KI Y+ +PS Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLARKEQCLALGTQVKTSFKITDYKIYRIFPS 92
BLAST of EY686123 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.710e-19 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 212 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK----YQFYPS 463 L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+KEQCLALG +L+ K+KI Y+ +P+ Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPN 92 The following BLAST results are available for this feature:
BLAST of EY686123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY686123 ID=EY686123; Name=EY686123; organism=Citrus sinensis; type=EST; length=811bpback to top |