EY710688

Overview
NameEY710688
Unique NameEY710688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1025
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710688 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.428e-32
Identity = 84/175 (48.00%), Postives = 113/175 (64.57%), Query Frame = 3
Query:  195 SSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGG-ETLTVAQVAAIATS--STNVELSESAKEGVKASSDWVMESMNKGTDSYGVTTGFGATSPRRTKNGGALPKELIKIFNAGIFGNGTKSFSPPPSLQQTRAALAW*GLNPFPRATPGTHFKTWKAI-----HKVCPI 695
            S+ D LNWG   E+LKGSHLEEVK MVAEYR+ V+++GG ETLTV++VAA+A       V+LSESA+EGV +S  W++++++KG   YGVTTGFGA S R+T+ G AL KE+++  N  IFG  T+     P    TRAA+    +N   +   G  F+  +AI     H V PI
Sbjct:   17 SNTDPLNWGNAVESLKGSHLEEVKGMVAEYREAVIHVGGGETLTVSKVAAVANQYLQAKVDLSESAREGVDSSCKWIVDNIDKGIPIYGVTTGFGANSNRQTQEGLALQKEMVRFLNCAIFGYQTELSHTLPK-SATRAAMLV-RVNTLLQGYSGIRFEILEAITKLLNHNVTPI 189          
BLAST of EY710688 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 9.259e-32
Identity = 83/181 (45.86%), Postives = 109/181 (60.22%), Query Frame = 3
Query:  204 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA----TSSTNVELSESAKEGVKASSDWVMESMNKGTDSYGVTTGFGATSPRRTKNGGALPKELIKIFNAGIFGNGTKSFSPPPSLQQTRAALAW*GLNPFPRATPGTHFKTWKAIHKVCPIQNFPPWPPFFRGT 734
            D LNWG  A  + GSHL+EVKRMVA++R+P+V + G TL V QVAA+A     +   VEL E A+  VKASS+W++  +  G D YGVTTGFG TS RRTK+G AL  EL++  NAGIFG G+   + P   +  RAA+    +N   +   G  F+  +AI K+      P  P   RGT
Sbjct:   11 DPLNWGAAAAEMAGSHLDEVKRMVAQFREPLVKIQGATLRVGQVAAVAQAKDAAGVAVELDEEARPRVKASSEWILNCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVELLRHLNAGIFGTGSDGHTLPS--ETVRAAMLV-RINTLLQGYSGIRFEILEAITKLLNTGVTPCLP--LRGT 186          
BLAST of EY710688 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.295e-25
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  165 GLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEY-RKPVVNLGGETLTVAQVAAIAT-SSTNVEL-SESAKEGVKASSDWVMESMNKGTDSYGVTTGFGATSPRRTKNGGALPKELIKIFNAGIFGNGTKSFSPPPSLQQTRAAL 608
            GLC   ++  S  D LNW   A+ ++GSH EEVK MV  Y     +++ G++LT++ VAA+A  S   V+L + +AK  V+ SS+WV+  M KGTD+YGVTTGFGATS RRT  G  L KELI+  NAG+ G   ++     S   TRAA+
Sbjct:   19 GLC--TDFGSSGSDPLNWVRAAKAMEGSHFEEVKAMVDSYFGAKEISIEGKSLTISDVAAVARRSQVKVKLDAAAAKSRVEESSNWVLTQMTKGTDTYGVTTGFGATSHRRTNQGAELQKELIRFLNAGVLGKCPENVL---SEDTTRAAM 164          
BLAST of EY710688 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.215e-15
Identity = 53/98 (54.08%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  417 MESMNKGTDSYGVTTGFGATSPRRTKNGGALPKELIKIFNAGIFG-NGTKSFSPPPSLQQTRAALAW*GLNPFPRATPGTHFKTWKAI-----HKVCP 692
            MESM+KGTDSYGVTTGFGATS RRTK GGAL KELI+  NAGIFG NG    +  PS   TRAA+    +N   +   G  F+  +AI     H + P
Sbjct:    1 MESMDKGTDSYGVTTGFGATSHRRTKQGGALHKELIRFLNAGIFGTNGESGHTLAPS--ATRAAMLV-RINTLLQGYSGIRFEILEAITSLLNHSITP 95          
The following BLAST results are available for this feature:
BLAST of EY710688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PAL3_PHAVU1.428e-3248.00Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL1_ORYSJ9.259e-3245.86Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_PINTA1.295e-2546.36Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PALY_PERAE1.215e-1554.08Phenylalanine ammonia-lyase OS=Persea americana GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710688 ID=EY710688; Name=EY710688; organism=Citrus sinensis; type=EST; length=1025bp
ATTTCCTTTAGCTCATTCATTCTTCATCACTCCCATTCATTCTTCTTCTT
CTTCTTCTTCTTTCTACAGTTTTGGTATTTTTTGTAATTGCAGTAACATT
TACGTAAAACGATATGGAGATAGGTGCCACTACTGAGAATGGTCACCAGA
ACGGTGGCCTGGAGGGTTTGTGCAAGAATAACAATTACAATTACAGTTCT
GGGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCA
TTTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCA
ACCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACG
TCCTCTACGAATGTGGAGCTGTCGGAATCTGCCAAGGAAGGCGTCAAGGC
CAGCAGTGATTGGGTGATGGAGAGCATGAATAAAGGTACCGACAGTTACG
GCGTTACCACTGGCTTTGGTGCCACTTCTCCTCGGAGAACCAAGAACGGC
GGGGCTCTTCCAAAGGAGCTCATTAAAATTTTTAACGCTGGAATCTTTGG
AAACGGAACAAAATCCTTCTCCCCCCCTCCCTCCCTCCAGCAAACAAGGG
CCGCCCTGGCTTGGTAGGGGTTAAACCCCTTCCCCAGGGCTACTCCCGGC
ACCCATTTTAAAACCTGGAAAGCAATTCACAAAGTTTGTCCAATCCAAAA
CTTCCCCCCTTGGCCTCCCTTCTTTCGGGGCACAAAACCCGGGGTTTAGG
GGGGATCTGGTTTTCCCTTTTTTCCAACTTTGTGCGGAAGTGGACCCCCG
GGCCGGGCCCAATTTTAAAAAGGCCCACCGGGGCCTTATGGGGAGAAAAA
AACTTTTTAAGGGCCCCCAAAGAAGCCCCCCTCAAAAAAAAGGGGGGGTT
TTGGCGGGGTTTTTTTTTATGAATTGTTGACCCCCCCACAGAGGGGGGGA
GGGGACAGTTGCTCCTTCTTGTGGAATACGCAGGAGGGCCCAGGGTTGGG
GGGGGTGGGGGTTGTACTTTGGCGA
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