EY710680

Overview
NameEY710680
Unique NameEY710680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1008
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIK (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.604e-28
Identity = 74/213 (34.74%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   26 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I  ++ K          ++G NLN  +G   PG
Sbjct:   59 SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENI-LEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.27) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.604e-28
Identity = 74/213 (34.74%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   26 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I  ++ K          ++G NLN  +G   PG
Sbjct:   59 SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENI-LEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_PELPB (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.574e-28
Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E E++R+   L +    +  +M PLGSCTMK N          P F+ +HP  P +  QG  ++   L E L  I G  + +LQP AGA GE  G+++I+ YH++ G     + ++  SAHGTNPA+AA+ G  I+SV  +A G  +++ LR   +    +++ LM+T P+T G++E  I   + K     G     +G N+NA +G   PG
Sbjct:   50 ESEVVRHFVRLSNLNYHVDKNMYPLGSCTMKYNPKINDYTCDLPGFSALHPLQPGETTQGALQLMFELAEMLREIAGMAAVTLQPAAGAHGELTGILLIKKYHESIGSKRHKLLVVD-SAHGTNPASAALAGYDIISVKGNADGRTDLDDLRSKLDG---DVAALMLTNPNTIGLFETEI-LAISKMVHDNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLTE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium tepidum GN=gcvPB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.574e-28
Identity = 75/212 (35.38%), Postives = 116/212 (54.72%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E E++R+   L +    +  +M PLGSCTMK N          P FA++HP  P   +QG  ++   L E L  I G  + +LQP AGA GE  G+++I+ YH+  G+    + ++  SAHGTNPA+AA+ G + VSV  D  G  ++  LR   +     ++ LM+T P+T G++E++I  ++ K     G     +G N+NA +G   PG
Sbjct:   50 ESEVVRHFIRLSNLNYHVDKNMYPLGSCTMKYNPKINDYTCDLPGFASMHPLQPESTSQGALQLMYELAEMLKEIAGMKAVTLQPAAGAHGELTGILLIKKYHEKLGNKRHKLLVVD-SAHGTNPASAALGGYECVSVKCDESGCTDMGDLRAKLDG---EVAALMLTNPNTVGIFEKQI-PEIEKLVHGNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLL2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.574e-28
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E E++R+   L +    +  +M PLGSCTMK N            F+ +HP  P    QG  +M   L   L  I G  + +LQP AGA GE  G+++I+ YH+ARG     + ++  SAHGTNPA+AA+ G +I+SV ++A G  ++  L+   +     ++ LM+T P+T G++E+ I   + +   + G     +G N+NA +G   PG
Sbjct:   50 ESEVVRHFIRLSNMNYHVDKNMYPLGSCTMKYNPKVNDAACDLAGFSELHPLQPEKTVQGALQMMYELSGMLAEIAGMSAVTLQPAAGAHGELTGILLIKKYHEARGSKRSKLLVVD-SAHGTNPASAAIAGYEIISVSSNADGRTDLGDLKAKLDG---EVAALMLTNPNTIGLFEKDI-LTIAQMVHENGSLLYMDGANMNALLGITRPG 256          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_PROVI (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.963e-28
Identity = 77/212 (36.32%), Postives = 115/212 (54.25%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E E++R+   L +    +   M PLGSCTMK N        +   FA +HP  P    QG  ++ + L   L  ITG  S +LQP AGA GE AG+++I+ YH+A+    R   ++  SAHGTNPA+AA+ G  IVSV ++  G  ++  L+   E    +++ LM+T P+T G++E+ I   +     K G     +G N+NA +G   PG
Sbjct:   50 ESEVVRHFLRLSTLNYHVDKDMYPLGSCTMKYNPKINDETCSLEGFAALHPMQPESTVQGALQLMHELSGMLAEITGMASVTLQPAAGAHGELAGILLIKKYHEAQ-HSKRTTLLVVDSAHGTNPASAALAGYTIVSVKSNGIGRTDLNDLK---EKLNGDVAALMLTNPNTIGLFEKEI-VAIADMVHKNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_RHOBA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Rhodopirellula baltica GN=gcvPB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.961e-26
Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E +++R+   L +  +S+     PLGSCTMK N        + P F N+HP       QG  E+   L      I+G    S+QP AGA GE A L+V  AY + +G   RNV +   SAHGTNPA+A M G K  +V ++A G +++E L+   +   D  +  M+T P+T G+++ +I  ++ K     G     +G N+NA +G   PG
Sbjct:   54 EGDVVRHFVGLSTLNMSVDTHFYPLGSCTMKYNPKRNERIASLPGFLNVHPLQHESGLQGLLELLYELQGMFAEISGLPGVSMQPAAGAHGELAALLVAAAYFREQGS-DRNVVLTADSAHGTNPASAQMAGFKTKTVKSNANGLVDLEDLKAKLD---DKTAVFMLTNPNTLGLFDRQI-EEINKLVHDAGALIYLDGANMNAILGITRPG 260          
BLAST of EY710680 vs. ExPASy Swiss-Prot
Match: GCSPB_HALSA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Halobacterium salinarium GN=gcvPB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.562e-26
Identity = 74/212 (34.91%), Postives = 114/212 (53.77%), Query Frame = 2
Query:   29 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEKLRKAAEANRDNLSTLMVTYPSTHGVYEERI**DMPKYSPKMGVK*IWEGLNLNAPVGSDNPG 664
            E EL R+   L  +   +     PLGSCTMK N          P+ A +HP       QG   + ++L ++L  I G D+ +LQP AGAAGE+ G+++  AYH+A    HRN  I+P +AHGTN A+AA+ G  ++ + +   G ++++ L  A     +N + LM+T P+T G++E  I   + +     G    ++G NLNA +G   PG
Sbjct:   51 EPELARHYVRLSQQNYGVDSGPYPLGSCTMKYNPRFTEDAAALPAAA-VHPDRSETALQGTLAVMHDLQDYLGRIGGMDAVTLQPPAGAAGEFTGILIAEAYHEATDGGHRNEVIVPDAAHGTNFASAALGGYDVIELPSGDDGRVDLDALEAAL---GENTAALMLTNPNTLGLFERDI-EPIAEMVHDAGGLLYYDGANLNALLGRARPG 257          
The following BLAST results are available for this feature:
BLAST of EY710680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_SULIK1.604e-2834.74Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIA1.604e-2834.74Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_PELPB3.574e-2834.91Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLTE3.574e-2835.38Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLL23.574e-2834.43Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_PROVI7.963e-2836.32Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_RHOBA1.961e-2634.91Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_HALSA2.562e-2634.91Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710680 ID=EY710680; Name=EY710680; organism=Citrus sinensis; type=EST; length=1008bp
ACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACA
TTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCA
TTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGATGCCAGT
GACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCTGACCAGG
CTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCTGTGTACC
ATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTGCAGCTGG
TGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCAAGAGGAG
ACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGGGACAAAT
CCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTGGAACTGA
TGCCAAGGGTAACATCAACATTGAAAAGTTAAGGAAGGCCGCAGAAGCTA
ATAGGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAACTCATGGA
GTTTATGAAGAAAGGATTTGATGAGATATGCCAAAATATTCCCCAAAAAT
GGGAGTCAAGTAAATATGGGAGGGGCTTAACTTGAATGCCCCGGTCGGGT
CTGACAACCCCGGGTTAAATGGAAACCTAAAGTTTGCCCATCTCATCCCC
CCCCAAAAAATTTTTGCTTTCCCAATGGGGGGGGGGGGGCCCGGGGAAGG
GCCCCCTATTGGGGGGGAAAAAAAACACCTTTGCCCCCCTTTTCCCCCTT
CCCCCCCCCGGGGGGAAACCCCCCGGGGGGGGATTTCCGGGCCCCCCGAG
AAAATGCCCCCCACCCCCCGGGGGGCAAAAATTTTGGACACCCGCACCCC
CGGGGGGGGGCCCTGCCACACTTTATCTCCTGGGCCACAAATTAATAAAA
ATAATCGATAACAGAAAAAAGACTTTATTAAAAGGGGGGGGGTCTCTCAC
TAAGAGAG
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