EY685747

Overview
NameEY685747
Unique NameEY685747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_VIBPA (Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.283e-23
Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFK 433
            ISIDG  E  F+++  KRFE  GWHVI   +G+   D I AAI+ AKA   +PTLI   T IGFGSPNK+ S+  HG+ LGA+E+ ATRK LGW + PF +P++            A     N    F  YE  YP    EFK
Sbjct:  186 ISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHDA-DAINAAIEAAKA-DPRPTLICTKTIIGFGSPNKSGSHDCHGAPLGAEEIAATRKELGWEHGPFEIPQEVYAEWSAKETGAAKEAAWN--EKFAAYEAAYPELAAEFK 324          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVY (Transketolase 2 OS=Vibrio vulnificus (strain YJ016) GN=tkt2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 66/153 (43.14%), Postives = 83/153 (54.25%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKAYQQTSNPCQ 463
            ISIDG  E  F+++  KRFE  GWHVI   +G+   + I AAI+ AKA   +PTLI   T IGFGSPNK+ S+  HG+ LGA+E+ ATRK LGW + PF +P++            A     N    F  YE  YP    EFK       P Q
Sbjct:  186 ISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHNA-EAINAAIEAAKA-DPRPTLICTKTIIGFGSPNKSGSHDCHGAPLGAEEIAATRKELGWEHGPFEIPQEVYAEWSAKEAGAAKEAAWN--EKFAAYEAAYPELAAEFKRRVNGELPAQ 334          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVU (Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 66/153 (43.14%), Postives = 83/153 (54.25%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKAYQQTSNPCQ 463
            ISIDG  E  F+++  KRFE  GWHVI   +G+   + I AAI+ AKA   +PTLI   T IGFGSPNK+ S+  HG+ LGA+E+ ATRK LGW + PF +P++            A     N    F  YE  YP    EFK       P Q
Sbjct:  186 ISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHNA-EAINAAIEAAKA-DPRPTLICTKTIIGFGSPNKSGSHDCHGAPLGAEEIAATRKELGWEHGPFEIPQEVYAEWSAKEAGAAKEAAWN--EKFAAYEAAYPELAAEFKRRVNGELPAQ 334          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT1_ECOLI (Transketolase 1 OS=Escherichia coli (strain K12) GN=tktA PE=1 SV=5)

HSP 1 Score: 106.686 bits (265), Expect = 7.314e-23
Identity = 61/142 (42.96%), Postives = 80/142 (56.34%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEF 430
            ISIDG  E  FT++   RFE  GWHVI   +G+     I+ A++EA+AVTDKP+L+   T IGFGSPNKA ++  HG+ LG  E+  TR+ LGW Y PF +P +           +A     N    F  Y K YP +  EF
Sbjct:  187 ISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAAS-IKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWN--EKFAAYAKAYPQEAAEF 325          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT_BACSU (Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22
Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPY-EPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP 412
            IS+DGD + +F+ENV +RFE + W V++V++GN   +++ AAI++A+    KPTLI V TTIGFGSPN+A +  VHG+ LG +E   T++   W Y E F VP +  +   VA+       +      F  Y++ YP
Sbjct:  188 ISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNN-IEELTAAIEKARQNEKKPTLIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAVAVKESGEKKEQEWNAQFAKYKEVYP 323          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_PASMU (Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.353e-21
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPED 316
            +ISIDG  +  FT++  KRFE  GWHVI   +G+   + I  A+K+A+A T KPTLI   T IG+GSPNKANS+  HG+ LG  E+ A R+ L W + PF +P +
Sbjct:  186 NISIDGHVDGWFTDDTQKRFEAYGWHVIPAVDGHNP-EQILEAVKQAQAETTKPTLIICKTIIGYGSPNKANSHDCHGAPLGDDEIAAAREFLKWEHAPFEIPAE 289          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT1_PASMU (Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.353e-21
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPED 316
            +ISIDG  +  FT++  KRFE  GWHVI   +G+   + I  A+K+A+A T KPTLI   T IG+GSPNKANS+  HG+ LG  E+ A R+ L W + PF +P +
Sbjct:  186 NISIDGHVDGWFTDDTQKRFEAYGWHVIPAVDGHNP-EQILEAVKQAQAETTKPTLIICKTIIGYGSPNKANSHDCHGAPLGDDEIAAAREFLKWEHAPFEIPAE 289          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT_BACHD (Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.014e-21
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYE-PFPVPED 316
            IS+DGD   +F+E+V+ RF+  GWHV+ V++GN   D+I  AI+EAKA  ++P+LI V TTIGFGSPNK      HG+ LGA EV  T++   W YE  F +PE+
Sbjct:  189 ISLDGDLHHSFSESVEDRFKAYGWHVVRVEDGNN-LDEIAKAIEEAKA-DERPSLIEVKTTIGFGSPNKGGKSVSHGAPLGADEVKLTKEAYEWTYENEFHIPEE 291          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT_HAEIN (Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21
Identity = 63/149 (42.28%), Postives = 81/149 (54.36%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVP-----EDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFK 433
            +ISIDG  +  F+++  +RFE  GW VI   +G+   + IRAA   A+A   KPTLI   T IGFGSPNK+ S+  HG+ LG +E+D TRK LGW Y PF +P     E   K  G A        + +    F  Y K YP    EFK
Sbjct:  186 NISIDGHVDGWFSDDTAERFEAYGWQVIRNVDGHDA-EQIRAATILAQAEKGKPTLIICKTIIGFGSPNKSGSHDSHGAPLGDEEIDLTRKALGWEYAPFEIPAEYYAEWSAKEKGAA-------AEKSWEEKFAAYAKAYPELAAEFK 326          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_ECOLI (Transketolase 2 OS=Escherichia coli (strain K12) GN=tktB PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21
Identity = 51/104 (49.04%), Postives = 68/104 (65.38%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPED 316
            ISIDG+TE  FT++  KRFE   WHVI   +G+     ++ AI EA++V DKP+LI   T IGFGSPNKA     HG+ LG +EV   R+ LGW + PF +P++
Sbjct:  186 ISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDP-QAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKE 288          
The following BLAST results are available for this feature:
BLAST of EY685747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
TKT2_VIBPA3.283e-2345.45Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2... [more]
TKT2_VIBVY4.288e-2343.14Transketolase 2 OS=Vibrio vulnificus (strain YJ016... [more]
TKT2_VIBVU4.288e-2343.14Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 ... [more]
TKT1_ECOLI7.314e-2342.96Transketolase 1 OS=Escherichia coli (strain K12) G... [more]
TKT_BACSU2.128e-2240.88Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=... [more]
TKT2_PASMU2.353e-2148.57Transketolase 2 OS=Pasteurella multocida GN=tktB P... [more]
TKT1_PASMU2.353e-2148.57Transketolase 1 OS=Pasteurella multocida GN=tktA P... [more]
TKT_BACHD4.014e-2150.48Transketolase OS=Bacillus halodurans GN=tkt PE=3 S... [more]
TKT_HAEIN6.846e-2142.28Transketolase OS=Haemophilus influenzae GN=tktA PE... [more]
TKT2_ECOLI6.846e-2149.04Transketolase 2 OS=Escherichia coli (strain K12) G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-025-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685747 ID=EY685747; Name=EY685747; organism=Citrus sinensis; type=EST; length=538bp
TCACATCTCTATTGATGGAGACACGGAGATTGCCTTTACGGAGAACGTTG
ACAAGCGTTTTGAAGGTCTTGGCTGGCATGTTATCTGGGTGAAGAATGGA
AACACTGGCTATGATGATATTCGTGCTGCTATTAAGGAAGCAAAGGCTGT
CACAGATAAACCCACTTTGATTAGGGTGACTACAACCATTGGCTTTGGGT
CTCCAAACAAAGCCAACAGCTACAGTGTACATGGAAGTGCGCTGGGTGCC
AAGGAAGTAGATGCTACTAGAAAGAATCTTGGATGGCCCTACGAGCCTTT
CCCTGTGCCAGAAGATGGTTAAAAAGCACTTGGAGTCGCCATGTTGCTGA
GGGCCCCGCTCTTGAAGCTGAACGGAATGCCCAACTTCGTTAATTATGAA
AAAAACTACCCCTGAAAAACCTGCGAATTTAAGGCCTATCAACAGACGTC
CAATCCATGCCAGTCGGGGAGAAAACCCATTCGAACATAGAAGCCCAGAA
ACACCCAGCGACACCCACCAAAAACTTTTCTCCAACAA
back to top