EY685707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_XANP2 (50S ribosomal protein L27 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 464 A KK GS++NGRDS + LGVK+FGG+ VIPGNIIVRQRGT++HPG VGMGKDHTL+AL EG+V F+ K + R +V V P Sbjct: 2 AHKKAGGSSRNGRDSDGRRLGVKRFGGQDVIPGNIIVRQRGTKWHPGTNVGMGKDHTLFALVEGKVTFQT-KANDRTYVSVLP 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_SACD2 (50S ribosomal protein L27 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 458 A KK GST+NGRDS+ K LGVK+FGGE V G+IIVRQRGTR HPG+ VG+GKDHTL+A EG VKFE + RK+V + Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGETVTAGSIIVRQRGTRVHPGENVGLGKDHTLFAKVEGAVKFEVKGPNNRKYVSI 82
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_PROMH (50S ribosomal protein L27 OS=Proteus mirabilis (strain HI4320) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALADGKVKFEVKGPNNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_BARBK (50S ribosomal protein L27 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 464 A KK GS++NGRDS+ K LGVKKFGGE VI GNII+RQRGTR+HPG+ VG+GKDHTL++L G V F + K++ R +V V P Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIAGNIIIRQRGTRWHPGENVGIGKDHTLFSLANGTVSF-RTKVNNRSYVSVIP 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_AZOC5 (50S ribosomal protein L27 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 464 A KK GS++NGRDS + LGVKKFGG+ V+ GNIIVRQRGT++HPG VGMGKDHTL+AL EGRV+F + K + R +V V P Sbjct: 2 AHKKAGGSSRNGRDSDGRRLGVKKFGGQAVVSGNIIVRQRGTKWHPGTNVGMGKDHTLFALVEGRVEF-RTKANDRTYVSVVP 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_AGRRK (50S ribosomal protein L27 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 467 A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGT +HPG VG+GKDHT++AL G V + + K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSQSKRLGVKKFGGEAVIAGNIIVRQRGTEWHPGTNVGLGKDHTIFALTAGNVNY-RTKANGRVYVSVMPK 84
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_SULNB (50S ribosomal protein L27 OS=Sulfurovum sp. (strain NBC37-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 464 A KK GST+N RDS + LGVKKFGGE+VIPGNII+RQRGT+ HPG+ VGMGKDHT++A+ EG VKFE S +K V V P Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGGEKVIPGNIIIRQRGTKVHPGNGVGMGKDHTIFAMVEGVVKFENRSRS-QKRVSVVP 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_PSEA6 (50S ribosomal protein L27 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 458 A KK GST NGRDS+ K LGVK++GGE V+ GNIIVRQRGTRFH G+ +G+GKDHTL+AL +G+V+FE RK+V + Sbjct: 2 AHKKAGGSTNNGRDSESKRLGVKRYGGESVLAGNIIVRQRGTRFHAGNNMGIGKDHTLFALSDGKVQFEVKGPKNRKFVSI 82
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_PELUB (50S ribosomal protein L27 OS=Pelagibacter ubique GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 52/83 (62.65%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 464 ATKK GS++NGRDS + LGVKK+GGE VIPGNIIVRQRGT+ PG+ VGMGKDH+++++ EG+V F+K K S R +V V+P Sbjct: 2 ATKKAGGSSRNGRDSAGRRLGVKKYGGEVVIPGNIIVRQRGTKIFPGENVGMGKDHSIFSVVEGKVVFKKGK-SDRTFVSVKP 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_LEGPL (50S ribosomal protein L27 OS=Legionella pneumophila (strain Lens) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 470 A KK GST+NGRDS PK LGVK+FGG+ V G IIVRQRGTRFHPG VG G+DHTLYAL EG V+F RK+V + P++ Sbjct: 2 AHKKAGGSTRNGRDSNPKYLGVKRFGGQFVNAGEIIVRQRGTRFHPGPGVGCGRDHTLYALVEGLVQFTTKGEKNRKYVTILPEQ 86 The following BLAST results are available for this feature:
BLAST of EY685707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685707 ID=EY685707; Name=EY685707; organism=Citrus sinensis; type=EST; length=707bpback to top |