EY685707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RM27_DICDI (Probable 39S ribosomal protein L27, mitochondrial OS=Dictyostelium discoideum GN=mrpl27 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 207 RRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKH-KLSGRKWVHVEPKEGHVLHPLYAN 500 +R+ATKK+AGSTKNGR S+PKNLG+KK G + V PG II+RQRGT FHPG +VGMGKDHT+++ G V F K K G K + + + PLY N Sbjct: 23 KRFATKKSAGSTKNGRTSQPKNLGLKKSGNQLVYPGEIIIRQRGTEFHPGTFVGMGKDHTIFSKTIGLVSFSKEPKFPGSK----KTRRFISVAPLYTN 117
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPY (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPS (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPP (50S ribosomal protein L27 OS=Yersinia pestis (strain Pestoides F) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPN (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPG (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPE (50S ribosomal protein L27 OS=Yersinia pestis GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPB (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERPA (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83
BLAST of EY685707 vs. ExPASy Swiss-Prot
Match: RL27_YERP3 (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 216 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 461 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+AL +G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISIE 83 The following BLAST results are available for this feature:
BLAST of EY685707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685707 ID=EY685707; Name=EY685707; organism=Citrus sinensis; type=EST; length=707bpback to top |