EY685549

Overview
NameEY685549
Unique NameEY685549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = 2
Query:   29 SCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 445
            + +AR  +  +  K+    AH +R + L  AK+ LEDV++ K AIP+ R+   V       +R   G GR+PVK+AK  +DLL N E+NAE KG++ D+L I H+  N+ +  ++ T +A+GR         ++E+ ++
Sbjct:   12 NARARIVEADISLKDAVNIAHHIRGMKLDYAKQILEDVVSKKYAIPYFRYLDSVS------HRPGKGPGRYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVIVT 144          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_METST (50S ribosomal protein L22P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 2
Query:   26 KSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            K  KA G  L++  K++ E    +R + L  AK +LEDV+A K  +PF R  + VG  +  K       GR+PVK+A  IL +L+NAE+NAE + LDV+ L + H+  N+    R  T RA GR +P  +   HI++ L
Sbjct:   16 KIAKAAGHSLKISPKHSVEICRTIRNMYLEDAKAFLEDVIAKKTVVPFKRHNKKVGHRSDLKGWP---SGRYPVKAAAAILKVLENAEANAENEELDVENLKLVHVCANRGVIIRGWTPRAFGRASPSNTPTTHIQIVL 151          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_METKA (50S ribosomal protein L22P OS=Methanopyrus kandleri GN=rpl22p PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.108e-17
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 2
Query:   26 KSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            ++ KA   +LR+  K+ RE   A+R + L +AK +L  V+  ++A+PF +  + V    Q   R     GR+P K+A+ IL +L++AE+NAE KGLD D LYI HI  ++ +  R    RA GR  P+ +   HIE+ L
Sbjct:   20 RTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQI--RPGWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVIL 156          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 2
Query:   17 NPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            +P +  +A G DLR+  K   E    LR + L  A RYL++V+A K+ +P  R+    G     K     G GR+PVK AK I  +L NA++NAE KGLD D L I HI  ++    R    RA GR  P+     HIE+ +
Sbjct:   13 DPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDEVIALKRPVPLRRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_STAMF (50S ribosomal protein L22P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.044e-17
Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 2
Query:   23 TKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVG--RTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            ++  KA   D+ V  K+ REA  A+R   +++AK+ LE+V+A ++ IPF R+   +   R   AK + P G  R+PVK+AK++L LL++ E+NA+ KGLD D L I HI  ++    +R   RA GR  P      H+E+ +
Sbjct:   14 SRIAKAVQFDIPVSIKDMREAVAAIRGKKVSEAKKLLENVIALREPIPFKRYKGKLSHKRGLPAKWKWPIG--RYPVKAAKYLLRLLEHVEANADNKGLDKDKLVIVHIAAHKGMTLKRWMPRAFGRATPKFRRTSHVEIVV 153          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_METTH (50S ribosomal protein L22P OS=Methanobacterium thermoautotrophicum GN=rpl22p PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.044e-17
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 2
Query:   29 SCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            + +A  + L++  K+  E    +R + L KAK+YLE+V+  ++ + F R+ R VG     +  N    GR+PVK+A  IL +L+NAE+NAE KGLD + L I HI  ++    R    RA GR  P+ +   H+++ L
Sbjct:   16 TARASATHLKISPKHAVEICREIRGMELEKAKKYLEEVIRMERPVAFKRYNRKVGHR---RGLNGWASGRYPVKAAGQILKVLENAEANAEYKGLDTEKLRIIHISSHRGPVIRGWIPRAFGRATPFNTPTTHVQIVL 150          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.181e-16
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 2
Query:   20 PTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 436
            P ++ KA   D+ + +K T E    ++  S+ +A+R L ++   K+++P  R+ + VG  +        G GR+PVK AK +L LL N E+NAE KGL+V+ L I H   ++  K R    RA GR  PY     H+E+
Sbjct:   12 PERTAKASLRDVSMSYKLTVETLRLIKGKSIEEARRILTEIAEMKRSVPLKRYNKKVGHRSDVP-----GPGRYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEI 145          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.015e-16
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 2
Query:   17 NPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 442
            +P +  +A G DLR+  K   E    LR + L  A RYL+DV+A ++ +P  R+    G     K     G GR+PVK AK I  +L NA++NA+ KGLD D L I HI  ++    R    RA GR  P+     HIE+ +
Sbjct:   13 DPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVV 150          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 2
Query:   35 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 445
            +A+ ++L V  K++ E A  ++ ++ T+AK YL DV+A K+AIPF RF R V   A  +  +    GR+PVK+A+  + LL++ E NAE  GLDV+ L I H   N  +  R    RA GR  P      +IE+ ++
Sbjct:   17 RAKANELPVSPKHSIEIARFIKNMTTTEAKAYLTDVVALKKAIPFKRFNRNV---AHKRGLSKWPAGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150          
BLAST of EY685549 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 2
Query:   26 KSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFC--RGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 445
            KS KA   D  + +K   E A  L+ + + +A+R+LE V   ++ IP  R+   +   R   AK + P G  R+PVK+AK +L LL N  +NAEVKGLD + L I HI V++ +  +R   RA GR  P      HIE+ ++
Sbjct:   14 KSAKAMVWDAPISYKKIVELARLLKGMKVDEARRFLERVARGEEPIPVRRYSGKQAHHRGLAAKYKWPIG--RYPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIVVA 153          
The following BLAST results are available for this feature:
BLAST of EY685549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
RL22_THEVO1.822e-1734.5350S ribosomal protein L22P OS=Thermoplasma volcani... [more]
RL22_METST1.822e-1738.8550S ribosomal protein L22P OS=Methanosphaera stadt... [more]
RL22_METKA3.108e-1738.1350S ribosomal protein L22P OS=Methanopyrus kandler... [more]
RL22_PYRHO6.925e-1738.7350S ribosomal protein L22P OS=Pyrococcus horikoshi... [more]
RL22_STAMF9.044e-1738.0350S ribosomal protein L22P OS=Staphylothermus mari... [more]
RL22_METTH9.044e-1736.2350S ribosomal protein L22P OS=Methanobacterium the... [more]
RL22_THEPD1.181e-1635.2550S ribosomal protein L22P OS=Thermofilum pendens ... [more]
RL22_PYRAB2.015e-1638.0350S ribosomal protein L22P OS=Pyrococcus abyssi GN... [more]
RL22_METMJ5.862e-1637.9650S ribosomal protein L22P OS=Methanoculleus maris... [more]
RL22_HYPBU7.656e-1638.0350S ribosomal protein L22P OS=Hyperthermus butylic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-020-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685549 ID=EY685549; Name=EY685549; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGCGGATAATCCCACCAAGTCATGCAAAGCTAGAGGCTCTG
ATCTCCGTGTTCACTTCAAGAACACTAGGGAGGCAGCCCATGCTCTTAGA
AAGCTGTCTTTGACCAAGGCTAAAAGGTACTTGGAGGATGTTATGGCTCA
CAAGCAAGCCATACCATTCACCCGCTTCTGTCGCGGTGTTGGGCGAACTG
CACAGGCTAAAAACCGTAATCCAAATGGTCAAGGTCGCTGGCCGGTTAAA
TCTGCAAAGTTCATTCTGGATTTACTCAAGAATGCTGAGAGTAATGCAGA
GGTGAAAGGCTTAGATGTGGACGCGCTTTACATTTCTCACATCCAAGTGA
ATCAAGCCCAGAAGCAGAGGCGTCGGACTTATCGTGCACATGGAAGGATT
AACCCATACATGTCTTCCCCATGTCATATTGAGTTGACACTCTCAGAAAA
GGAGGAACCTGTGAAGAAAGAGCCGGAGACCCAGTTGGCTTCCAGGAAAC
CGAGGACAGCTACATAGTGGTGCCTTATCTTGAATGTTGGGAGTCCTGAG
TTGATTTCTCTTTTTTCCCCCCTTTGTACTACCATGACAACATACAATTT
TGTTTACAAGATACTTGTTCCCTGAAGACTTCTGTTGGGTCAGTATTTAA
TTTTATTCTGTCTTGCCATGGCTCGCTTACCATGATAGTTCTCAATGGAA
TTTTTAATGGGGTTTTGGTTAGGGTTGACTTTCCCCCAACAATGCTTGCT
TAGGCCTTTCCAATGATTTACTACAGGTCAAAATGGGGCCATTACGATGT
AGCAGAGGCGGTAACTTTATCAGATTTAAAATGGACCAGAAGAAAGTACG
ATATAACAGAACAGAAAAACACGCCCGGGCGATATCAAACAAACC
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