EY710526

Overview
NameEY710526
Unique NameEY710526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 2.159e-59
Identity = 107/169 (63.31%), Postives = 133/169 (78.70%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V  VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y++G+     G++  TG TEFD TEK I PMGGF HYG+VK ++LM+KGC  GP+KR +TL +S+  QT R  LE+I +KFIDTS KFG
Sbjct:  206 VNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFG 374          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 3.117e-58
Identity = 108/172 (62.79%), Postives = 136/172 (79.07%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TL +SLL QT R  LE+I +KFIDT+ KFG
Sbjct:  204 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 2.020e-57
Identity = 102/172 (59.30%), Postives = 133/172 (77.33%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PVH+VF ++E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+Y++G+      G    +   T +D T+K ITP+GGFPHYG V +D++M+KGC  G KKRV+TL +SLL   SR  LE I++KFIDT+ KFG
Sbjct:  204 QVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4)

HSP 1 Score: 222.631 bits (566), Expect = 2.639e-57
Identity = 103/165 (62.42%), Postives = 131/165 (79.39%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V +VF+++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG  E++ G T FDRT+K ITPMGGF HYG +K+D++M+KGC  G +KR+VTL +SL   TSR  LEE+ +K+IDT+ KFG
Sbjct:  203 VAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.677e-57
Identity = 102/169 (60.36%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+ V  VF +DEMID IGVT+G G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK     +  + G TEFD T+K ITPMGGFP YGIV  DY+M++G  +GPKKR++TL +SL+ QT R   E+I +K+IDTS K G
Sbjct:  204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTG 372          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.003e-56
Identity = 102/165 (61.82%), Postives = 131/165 (79.39%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V +VF+++EMID++ VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GKG  E++   TEFDRT+K ITPMGGF HYG + +D++++KG   G +KRVVTL +SL   TSR  LEE+ +K+IDT+ KFG
Sbjct:  203 VAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.710e-56
Identity = 102/169 (60.36%), Postives = 130/169 (76.92%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            QI V  VF +DEMID IGVTKG G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK     +  + G TEFD T+K I PMGGFP YG+V  DY+M++G  +GPKKR++TL +SL+ QT R   E+I +K+IDTS K G
Sbjct:  204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTG 372          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.234e-56
Identity = 102/165 (61.82%), Postives = 128/165 (77.58%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V +VF+KDEM+D+  VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G  G ES +G TEFDRT+K I PMGGF  YG VK+D++++KG   G KKR+VT+ +SL   TSR   E + +K+IDT+ KFG
Sbjct:  203 VSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 2.234e-56
Identity = 100/172 (58.14%), Postives = 131/172 (76.16%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ------ESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PVH+VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK++++G+G          +   T +D T K ITP+GGFPHYG V +D++M+KGC  G KKRV+TL +SLL   SR  +E I++KFIDT+ KFG
Sbjct:  204 QVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 3.810e-56
Identity = 104/176 (59.09%), Postives = 135/176 (76.70%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFGAWAASRLPREK 540
            I + ++F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N KV+++GKG  E +   T+FD ++K ITPMGGF  YG VK+DY+M+KG   G KKRV+TL ++L  QTSR   E++++K+IDTS KFG   A + P EK
Sbjct:  204 IEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNAS-TDFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFG-HGAFQTPEEK 377          
The following BLAST results are available for this feature:
BLAST of EY710526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_DICDI2.159e-5963.3160S ribosomal protein L3 OS=Dictyostelium discoide... [more]
RL3_MACFA3.117e-5862.7960S ribosomal protein L3 OS=Macaca fascicularis GN... [more]
RL3L_BOVIN2.020e-5759.3060S ribosomal protein L3-like OS=Bos taurus GN=RPL... [more]
RL3_YEAST2.639e-5762.4260S ribosomal protein L3 OS=Saccharomyces cerevisi... [more]
RL3_CAEEL7.677e-5760.3660S ribosomal protein L3 OS=Caenorhabditis elegans... [more]
RL3_KLULA1.003e-5661.8260S ribosomal protein L3 OS=Kluyveromyces lactis G... [more]
RL3_CAEBR1.710e-5660.3660S ribosomal protein L3 OS=Caenorhabditis briggsa... [more]
RL3_DEBHA2.234e-5661.8260S ribosomal protein L3 OS=Debaryomyces hansenii ... [more]
RL3L_HUMAN2.234e-5658.1460S ribosomal protein L3-like OS=Homo sapiens GN=R... [more]
RL3_ASPFU3.810e-5659.0960S ribosomal protein L3 OS=Aspergillus fumigatus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-C01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710526 ID=EY710526; Name=EY710526; organism=Citrus sinensis; type=EST; length=967bp
CTTTGANAGCAAATTCCTGTCCATGCTGTTTTCCAGAAGGATGAGATGAT
TGACATCATCGGTGTCACGAAAGGTAAAGGTTATGAAGGTGTTGTCACCC
GTTGGGGTGTTACCCGCCTTCCTCGCAAGACTCACAGAGGTCTGCGTAAG
GTGGCTTGTATTGGTGCCTGGCATCCTGCTAGGGTTTCCTTCACAGTTGC
CAGAGCTGGTCAGAATGGATACCATCATCGTACTGAAATGAACAAGAAGG
TTTACAAGCTTGGCAAGGGTGGACAGGAGTCTCACACTGGCATAACTGAA
TTTGACAGGACTGAGAAGGACATTACCCCAATGGGTGGCTTTCCTCACTA
TGGTATTGTGAAAGATGATTATTTGATGATCAAGGGATGCTGTGTTGGAC
CTAAAAAGAGGGTGGTCACGCTTCCTCAGTCGCTTCTCAAACAGACATCT
CGTTTTACTCTTGAGGAAATCAAAATCAAGTTCATTGATACCTCTTTCAA
GTTTGGGGCATGGGCCGCTTCCCGACTACCCCGGGAGAAACCGAAAGTAC
TATGGGACGCCTTGAAAGCCATAATTATGCTTAAAAAGAACAAGAAGTTT
TTGCCCCCCTTTTTGGTTAATTCCAGGCGGTCAAAAAATTTTTAACCCAG
TTTTGACTATACTTGGAAACAAATTTTTAGAACCAGGGAATCAACCTTTG
GATTTATTTTTTTTCCTTTTTTTTATATTTTTTTTTTTTTTAACAAGAAA
AGGGCCGGGGGGTTTTTTTTTCATATTAAAAAAAATTTTTTAAAGATTTA
AATAAAAAGTATTCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
GCAGGCCCGGGCTACTCAAAGAATGAAACCACCAACTACTAAATAACAAT
TTCCCACGACGCCATGAGGAAAGATGCCGCGCATAATCCAAACTTTTCAC
GAATATAAAATGGTGTA
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