EY710526

Overview
NameEY710526
Unique NameEY710526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.488e-56
Identity = 102/165 (61.82%), Postives = 128/165 (77.58%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V +VF+++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GKG  E +   T FDRT+K I PMGGF HYG+V +D++M+KG   G KKRVVTL +SL   TSR  +EE+ +K+IDT+ KFG
Sbjct:  203 VSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-TNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.945e-54
Identity = 97/165 (58.79%), Postives = 126/165 (76.36%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + + + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y++G  G ++    T+FD TEK ITPMGGF  YG+V++D++M+ G   GP KRV+TL +SLL  TSR  LE + +K+IDT+ KFG
Sbjct:  203 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.945e-54
Identity = 97/165 (58.79%), Postives = 126/165 (76.36%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + + + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y++G  G ++    T+FD TEK ITPMGGF  YG+V++D++M+ G   GP KRV+TL +SLL  TSR  LE + +K+IDT+ KFG
Sbjct:  203 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFG 366          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.770e-53
Identity = 99/176 (56.25%), Postives = 132/176 (75.00%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFGAWAASRLPREK 540
            + + ++F+KDE+ID+I VTKG G+ GV  RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG  E  +  TE D T+K ITPMGGF  YG + +D++M+KG   G KKRV+TL +S+   TSR  LE++++K+IDTS +FG   A + P EK
Sbjct:  204 VSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFG-HGAFQTPAEK 377          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.187e-49
Identity = 96/166 (57.83%), Postives = 125/166 (75.30%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            +I +  VF  +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK+VY +G G        TEFD TEK I+PMGGFPHYG V++D++M+KG  VG +KRVVTL +SLL+Q +    EE+ IKF+DTS K G
Sbjct:  198 EIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSSNIK---TEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQRAG---EELVIKFVDTSSKIG 357          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_PIG (60S ribosomal protein L3 (Fragment) OS=Sus scrofa GN=RPL3 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.132e-42
Identity = 78/130 (60.00%), Postives = 102/130 (78.46%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMI 381
            ++PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR +F+VARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+G F HYG V +D++M+
Sbjct:    1 RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.840e-34
Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFK 501
            +I V  + Q+ E++DI+ VTKGKG +G V RWGV     K  +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ G+ +  G       + +ITP GGFPHYG+VK+D++MI G   G  KR++ +  ++     R   E  +I +I    K
Sbjct:  201 EIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGENGKLTLNG------EKIEITPNGGFPHYGVVKNDFIMIAGTIPGAIKRIIRMRPAVRPPAKRPPAEAPQITYISRESK 358          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32
Identity = 67/164 (40.85%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFK 501
            ++ V  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+ G+     +   + TE +ITP GGFPHYGIV+ D++MI G   G  KR++ +  ++     +  ++  +I ++    K
Sbjct:  206 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK-----LKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_PYRHO (50S ribosomal protein L3P OS=Pyrococcus horikoshii GN=rpl3p PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.249e-32
Identity = 68/164 (41.46%), Postives = 100/164 (60.98%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFK 501
            +I V  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+ G+         D  E +ITP GGFPHYGIV+ D++MI G   G  KR++ +  ++     +  ++  +I ++    K
Sbjct:  204 EIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.938e-32
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFK 501
            ++ V  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+ G+         D  E +ITP GGFPHYGIV+ D++MI G   G  KR++ +  ++     +  ++  +I ++    K
Sbjct:  203 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360          
The following BLAST results are available for this feature:
BLAST of EY710526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_CANGA8.488e-5661.8260S ribosomal protein L3 OS=Candida glabrata GN=RP... [more]
RL3B_SCHPO7.945e-5458.7960S ribosomal protein L3-B OS=Schizosaccharomyces ... [more]
RL3A_SCHPO7.945e-5458.7960S ribosomal protein L3-A OS=Schizosaccharomyces ... [more]
RL3_NEUCR1.770e-5356.2560S ribosomal protein L3 OS=Neurospora crassa GN=r... [more]
RL3_ENCCU1.187e-4957.8360S ribosomal protein L3 OS=Encephalitozoon cunicu... [more]
RL3_PIG3.132e-4260.0060S ribosomal protein L3 (Fragment) OS=Sus scrofa ... [more]
RL3_THESM1.840e-3444.5150S ribosomal protein L3P OS=Thermococcus sibiricu... [more]
RL3_PYRFU1.722e-3240.8550S ribosomal protein L3P OS=Pyrococcus furiosus G... [more]
RL3_PYRHO2.249e-3241.4650S ribosomal protein L3P OS=Pyrococcus horikoshii... [more]
RL3_PYRAB2.938e-3240.8550S ribosomal protein L3P OS=Pyrococcus abyssi GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-C01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710526 ID=EY710526; Name=EY710526; organism=Citrus sinensis; type=EST; length=967bp
CTTTGANAGCAAATTCCTGTCCATGCTGTTTTCCAGAAGGATGAGATGAT
TGACATCATCGGTGTCACGAAAGGTAAAGGTTATGAAGGTGTTGTCACCC
GTTGGGGTGTTACCCGCCTTCCTCGCAAGACTCACAGAGGTCTGCGTAAG
GTGGCTTGTATTGGTGCCTGGCATCCTGCTAGGGTTTCCTTCACAGTTGC
CAGAGCTGGTCAGAATGGATACCATCATCGTACTGAAATGAACAAGAAGG
TTTACAAGCTTGGCAAGGGTGGACAGGAGTCTCACACTGGCATAACTGAA
TTTGACAGGACTGAGAAGGACATTACCCCAATGGGTGGCTTTCCTCACTA
TGGTATTGTGAAAGATGATTATTTGATGATCAAGGGATGCTGTGTTGGAC
CTAAAAAGAGGGTGGTCACGCTTCCTCAGTCGCTTCTCAAACAGACATCT
CGTTTTACTCTTGAGGAAATCAAAATCAAGTTCATTGATACCTCTTTCAA
GTTTGGGGCATGGGCCGCTTCCCGACTACCCCGGGAGAAACCGAAAGTAC
TATGGGACGCCTTGAAAGCCATAATTATGCTTAAAAAGAACAAGAAGTTT
TTGCCCCCCTTTTTGGTTAATTCCAGGCGGTCAAAAAATTTTTAACCCAG
TTTTGACTATACTTGGAAACAAATTTTTAGAACCAGGGAATCAACCTTTG
GATTTATTTTTTTTCCTTTTTTTTATATTTTTTTTTTTTTTAACAAGAAA
AGGGCCGGGGGGTTTTTTTTTCATATTAAAAAAAATTTTTTAAAGATTTA
AATAAAAAGTATTCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
GCAGGCCCGGGCTACTCAAAGAATGAAACCACCAACTACTAAATAACAAT
TTCCCACGACGCCATGAGGAAAGATGCCGCGCATAATCCAAACTTTTCAC
GAATATAAAATGGTGTA
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