EY710526

Overview
NameEY710526
Unique NameEY710526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_METLZ (50S ribosomal protein L3P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.866e-21
Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTL 423
            + + ++  + +  DI G+TKGKG++G V R+G+T   RK  R    R +  +G W P  V + V   GQ G+  RTE NK++ K+G+   E              I P GGF HYG+V+++Y++IKG   GP KR+V +
Sbjct:  183 VDMKSLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHARTKKERHIGTLGPWTPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADE--------------INPAGGFLHYGLVRNNYVLIKGSIPGPAKRLVRI 307          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.400e-20
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA-RVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTL 423
            QIPV  VF++ ++ DIIGVTKGKG++GV+ R+ V   PR  K  +G RK   IGA  P+      V + GQ G+H RTE NK++ K+G    E              I P GG  +YG+VK+ YL+I+G  +G +KR + L
Sbjct:  193 QIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNE--------------INPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFL 316          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5)

HSP 1 Score: 98.9821 bits (245), Expect = 4.400e-20
Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 1
Query:   28 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVV 417
            +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G+G +                T  GGF +YG V   Y ++KG   GP KR+V
Sbjct:  194 IFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP---------------TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLV 310          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.747e-20
Identity = 52/155 (33.55%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIK 474
            ++ ++ VF++ + +D+I VTKGKG++GV+ R+ V R   K+ +G+RKV  IG+  P R+  TV   GQ GYH RTE NK + K+G                 + +   GG+  YG V    +++KG   GP+KR++ L +++     +  +E I+
Sbjct:  176 ELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIM (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIL (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIK (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_SULIA (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSL 435
            +I +  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK++ K+G                 K+I P GGF  YGIV++ Y++++G  +G KKR + L +++
Sbjct:  202 EISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV 329          
The following BLAST results are available for this feature:
BLAST of EY710526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_METLZ8.866e-2136.6950S ribosomal protein L3P OS=Methanocorpusculum la... [more]
RL3_SULAC4.400e-2041.8450S ribosomal protein L3P OS=Sulfolobus acidocalda... [more]
RL3_HALMA4.400e-2040.1550S ribosomal protein L3P OS=Haloarcula marismortu... [more]
RL3_NANEQ5.747e-2033.5550S ribosomal protein L3P OS=Nanoarchaeum equitans... [more]
RL3_SULIY7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]
RL3_SULIN7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]
RL3_SULIM7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]
RL3_SULIL7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]
RL3_SULIK7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]
RL3_SULIA7.506e-2037.5050S ribosomal protein L3P OS=Sulfolobus islandicus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-C01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710526 ID=EY710526; Name=EY710526; organism=Citrus sinensis; type=EST; length=967bp
CTTTGANAGCAAATTCCTGTCCATGCTGTTTTCCAGAAGGATGAGATGAT
TGACATCATCGGTGTCACGAAAGGTAAAGGTTATGAAGGTGTTGTCACCC
GTTGGGGTGTTACCCGCCTTCCTCGCAAGACTCACAGAGGTCTGCGTAAG
GTGGCTTGTATTGGTGCCTGGCATCCTGCTAGGGTTTCCTTCACAGTTGC
CAGAGCTGGTCAGAATGGATACCATCATCGTACTGAAATGAACAAGAAGG
TTTACAAGCTTGGCAAGGGTGGACAGGAGTCTCACACTGGCATAACTGAA
TTTGACAGGACTGAGAAGGACATTACCCCAATGGGTGGCTTTCCTCACTA
TGGTATTGTGAAAGATGATTATTTGATGATCAAGGGATGCTGTGTTGGAC
CTAAAAAGAGGGTGGTCACGCTTCCTCAGTCGCTTCTCAAACAGACATCT
CGTTTTACTCTTGAGGAAATCAAAATCAAGTTCATTGATACCTCTTTCAA
GTTTGGGGCATGGGCCGCTTCCCGACTACCCCGGGAGAAACCGAAAGTAC
TATGGGACGCCTTGAAAGCCATAATTATGCTTAAAAAGAACAAGAAGTTT
TTGCCCCCCTTTTTGGTTAATTCCAGGCGGTCAAAAAATTTTTAACCCAG
TTTTGACTATACTTGGAAACAAATTTTTAGAACCAGGGAATCAACCTTTG
GATTTATTTTTTTTCCTTTTTTTTATATTTTTTTTTTTTTTAACAAGAAA
AGGGCCGGGGGGTTTTTTTTTCATATTAAAAAAAATTTTTTAAAGATTTA
AATAAAAAGTATTCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
GCAGGCCCGGGCTACTCAAAGAATGAAACCACCAACTACTAAATAACAAT
TTCCCACGACGCCATGAGGAAAGATGCCGCGCATAATCCAAACTTTTCAC
GAATATAAAATGGTGTA
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