EY685491

Overview
NameEY685491
Unique NameEY685491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_NITEU (Arginine biosynthesis bifunctional protein argJ OS=Nitrosomonas europaea GN=argJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 3
Query:  318 SAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            +AA AI TTD+V K V+ + Q+ GT + + G+AKGSGMIHPNMATMLG               +V+ A +RSF+ +TVDGDT   D +
Sbjct:  149 AAAQAIMTTDIVPKGVSRQIQINGTTVTITGIAKGSGMIHPNMATMLGYIATDAAVTQPLLDDLVRYATDRSFNCVTVDGDTSTNDAL 236          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_SYMTH (Arginine biosynthesis bifunctional protein argJ OS=Symbiobacterium thermophilum GN=argJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.008e-14
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  321 AAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            AA AI TTD   K  A   ++GG  + +G MAKGSGMIHPNMATMLG             ++ ++ A +RSF+ ITVDGDT   D V
Sbjct:  146 AAEAIMTTDTFPKQAAARLEIGGATVTIGAMAKGSGMIHPNMATMLGFVTTDAAVDAAALREALREATDRSFNMITVDGDTSTNDMV 232          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_CARHZ (Arginine biosynthesis bifunctional protein argJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=argJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 3
Query:  318 SAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            +AA AI TTD V K +AVE +V G  ++VGG+AKGSGMIHPNMATML              ++ ++  V+ SF+ I+VDGD+   D V
Sbjct:  142 AAAEAIMTTDTVPKEIAVEFEVYGKTVKVGGIAKGSGMIHPNMATMLAFITTDIGMEKELLQETLREVVDESFNMISVDGDSSTNDMV 229          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_LISMO (Arginine biosynthesis bifunctional protein argJ OS=Listeria monocytogenes GN=argJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  330 AITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            AI TTD   K ++ ++++GG  + + G+AKGSGMIHPNMATML              +K++K+ V+++F+ ITVDGDT   D V
Sbjct:  145 AILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITVDGDTSTNDMV 228          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_LISMF (Arginine biosynthesis bifunctional protein argJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  330 AITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            AI TTD   K ++ ++++GG  + + G+AKGSGMIHPNMATML              +K++K+ V+++F+ ITVDGDT   D V
Sbjct:  145 AILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITVDGDTSTNDMV 228          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_LISIN (Arginine biosynthesis bifunctional protein argJ OS=Listeria innocua GN=argJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  330 AITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            AI TTD   K ++ ++++GG  + + G+AKGSGMIHPNMATML              +K++K+ V+++F+ ITVDGDT   D V
Sbjct:  145 AILTTDTFQKQISFQTEIGGKTVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITVDGDTSTNDMV 228          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_THIDA (Arginine biosynthesis bifunctional protein argJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=argJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.537e-14
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 3
Query:  321 AAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDT 578
            AA AI TTD+V+K  + + Q+ G  I V G+AKGSGMIHPNMATMLG             ++MV+   + SF+ +TVDGDT   D+
Sbjct:  149 AAAAIMTTDIVAKGASRQLQIDGRTITVTGIAKGSGMIHPNMATMLGFVATDAAIAPALMQRMVRDVADVSFNCVTVDGDTSTNDS 234          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_STAS1 (Arginine biosynthesis bifunctional protein argJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=argJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  330 AITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            AI TTD ++K ++V+ ++ GT + +GG AKGSGMIHPNMATMLG                +K ++++SF+ ITVDGD+   D V
Sbjct:  159 AILTTDTMTKHLSVKVEIDGTTVTIGGTAKGSGMIHPNMATMLGFITTDANIDANTLDYCLKQSIDQSFNMITVDGDSSTNDMV 242          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_CHRVO (Arginine biosynthesis bifunctional protein argJ OS=Chromobacterium violaceum GN=argJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  321 AAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDT 578
            AA AI TTD ++K+ +    +GG  + V G+AKGSGMIHPNMATMLG              ++V+   ++SF+ ITVDGDT   D+
Sbjct:  146 AAEAIMTTDTLAKAASRRLDIGGKAVTVTGIAKGSGMIHPNMATMLGFVATDAAVTRPMLNQLVREVADQSFNSITVDGDTSTNDS 231          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_LACLA (Arginine biosynthesis bifunctional protein argJ OS=Lactococcus lactis subsp. lactis GN=argJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.438e-13
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 3
Query:  324 AVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            A AI TTD  +K++  E+++GG  + + G+ KGSGMIHPNMATML              +K +   +  +F+ ITVDGDT   DTV
Sbjct:  142 AKAILTTDTQTKTINFEAEIGGQIVNMAGVCKGSGMIHPNMATMLAFITTDAKIAQALLQKTLSEIIETTFNQITVDGDTSTNDTV 227          
The following BLAST results are available for this feature:
BLAST of EY685491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
ARGJ_NITEU4.526e-1547.73Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_SYMTH1.008e-1448.28Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_CARHZ3.832e-1447.73Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_LISMO5.005e-1444.05Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_LISMF5.005e-1444.05Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_LISIN5.005e-1444.05Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_THIDA8.537e-1447.67Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_STAS13.244e-1345.24Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_CHRVO4.237e-1345.35Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_LACLA9.438e-1343.02Arginine biosynthesis bifunctional protein argJ OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-H11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685491 ID=EY685491; Name=EY685491; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCCCACGCGTCCGCTCGTTGCCAAAACTAGTCAATTCACT
TTCATCTTCAACTGAGGGGTATTTGCGTCATTCCACTCTACCTTGGCTAA
ATGGCGTACTTTCATTTTTGTTTAGGGACAGTCTTGCTTCTTATTCACCC
AAGATCTTACTCTTTGTGTTTTAATTGCTTTTGATTATTGTTGTTGTCGT
TATTGTTATTGTTATCATTTTCTTTTTTGCAAATAATCTAGGTATTTTTG
TCTCCTTACTTCTCCTTATCTGTCTAGACATTCCTGAATCTCTTATCAGT
GACTGTGCAGGGCAGATTCTGCAGCAGTAGCTATCACAACGACTGACCTT
GTGAGCAAGAGTGTGGCAGTTGAGTCTCAGGTTGGAGGGACGTATATAAG
AGTTGGGGGAATGGCGAAGGGTTCTGGGATGATTCACCCAAATATGGCTA
CCATGCTTGGTGTAGTAACAACTGATGCTTCTGTTGACTCTGACGTATGG
AAAAAGATGGTAAAGGTTGCTGTAAACCGAAGCTTTCACCCAATAACTGT
AGATGGAGATACTAAGATCTATGATACTGTAACAGCCTAGCCTAGACGAG
TCATCTAAATGAGCCAGGATATTTTCTGCTCGCTGAAGGCACAACAAAGG
ACCTCACCCATGCCATGACTGCGCAACCCCCAGCCTTCCCCACTCTATCC
TGCAACCCCCGCAACGCACAAGTCCCTCCCTCCCGCCCCCAGGCCCGACC
GCCAGAGTGCGATTACATGTGCCAAGCAAAACGCATAGTAGCCCATCCCC
CCAACAAGCAAGAAACGGATCATCCCACCGCGACACACCAGGCAAACT
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