EY685491

Overview
NameEY685491
Unique NameEY685491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_DICDI (Arginine biosynthesis bifunctional protein argJ, mitochondrial OS=Dictyostelium discoideum GN=argJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 3
Query:  318 SAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            SAA AI TTD V K V  + ++ G  + + G+ KG+GMIHPNMATML              K  +K +++ SF+ I VDGD    DTV
Sbjct:  166 SAAKAIMTTDKVPKLVQKQIEIQGKQVNITGICKGAGMIHPNMATMLCTLCTDADISEEALKSALKHSIDYSFNSINVDGDMSTNDTV 253          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_BACST (Arginine biosynthesis bifunctional protein argJ OS=Bacillus stearothermophilus GN=argJ PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 3
Query:  312 ADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            A++   AI TTD V K    ++ + G  + VGG AKGSGMIHPNMATML                 ++   + SF+ ITVDGDT   D V
Sbjct:  151 AEAFQTAILTTDTVMKRACYQTTIDGKTVTVGGAAKGSGMIHPNMATMLAFITTDANVSSPVLHAALRSITDVSFNQITVDGDTSTNDMV 240          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_METM6 (Arginine biosynthesis bifunctional protein argJ OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=argJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 3
Query:  315 DSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNM--ATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            ++A+ AI TTD   K+VAVE ++ G  +R+GG+AKG+GMI PNM  ATMLG                ++ A + SF+   VDGD    DTV
Sbjct:  142 ENASKAIMTTDAFPKTVAVEFEINGKNVRIGGIAKGAGMIAPNMLHATMLGFITTDIEISKEELTDSLQKATDESFNNAVVDGDMSTNDTV 232          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_THEMA (Arginine biosynthesis bifunctional protein argJ OS=Thermotoga maritima GN=argJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 3
Query:  324 AVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            A AI TTD   K  + +  + G  I V G+AKGSGMIHPNMATML              KK++K++V+ S++ I VDGDT   D V
Sbjct:  138 AEAIMTTDTKVKMHSTKVMIDGKEITVLGIAKGSGMIHPNMATMLSFITTDAKISEEALKKLLKLSVDDSYNMIDVDGDTSTNDMV 223          
BLAST of EY685491 vs. ExPASy Swiss-Prot
Match: ARGJ_DEHE1 (Arginine biosynthesis bifunctional protein argJ OS=Dehalococcoides ethenogenes (strain 195) GN=argJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 3
Query:  324 AVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGXXXXXXXXXXXXWKKMVKVAVNRSFHPITVDGDTKIYDTV 581
            A AI TTD  SK +AV   + G    + G AKG+GMIHPNMAT+LG             +  +K A + SF+ ITVDGDT   D++
Sbjct:  150 ARAIMTTDTRSKEIAVRVNIEGFQFYIAGAAKGAGMIHPNMATLLGFITTDASVSKDFLQFALKEAADISFNMITVDGDTSTNDSL 235          
The following BLAST results are available for this feature:
BLAST of EY685491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
ARGJ_DICDI3.965e-1143.18Arginine biosynthesis bifunctional protein argJ, m... [more]
ARGJ_BACST3.965e-1142.22Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_METM65.179e-1142.86Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_THEMA6.764e-1145.35Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_DEHE16.764e-1144.19Arginine biosynthesis bifunctional protein argJ OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-H11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685491 ID=EY685491; Name=EY685491; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCCCACGCGTCCGCTCGTTGCCAAAACTAGTCAATTCACT
TTCATCTTCAACTGAGGGGTATTTGCGTCATTCCACTCTACCTTGGCTAA
ATGGCGTACTTTCATTTTTGTTTAGGGACAGTCTTGCTTCTTATTCACCC
AAGATCTTACTCTTTGTGTTTTAATTGCTTTTGATTATTGTTGTTGTCGT
TATTGTTATTGTTATCATTTTCTTTTTTGCAAATAATCTAGGTATTTTTG
TCTCCTTACTTCTCCTTATCTGTCTAGACATTCCTGAATCTCTTATCAGT
GACTGTGCAGGGCAGATTCTGCAGCAGTAGCTATCACAACGACTGACCTT
GTGAGCAAGAGTGTGGCAGTTGAGTCTCAGGTTGGAGGGACGTATATAAG
AGTTGGGGGAATGGCGAAGGGTTCTGGGATGATTCACCCAAATATGGCTA
CCATGCTTGGTGTAGTAACAACTGATGCTTCTGTTGACTCTGACGTATGG
AAAAAGATGGTAAAGGTTGCTGTAAACCGAAGCTTTCACCCAATAACTGT
AGATGGAGATACTAAGATCTATGATACTGTAACAGCCTAGCCTAGACGAG
TCATCTAAATGAGCCAGGATATTTTCTGCTCGCTGAAGGCACAACAAAGG
ACCTCACCCATGCCATGACTGCGCAACCCCCAGCCTTCCCCACTCTATCC
TGCAACCCCCGCAACGCACAAGTCCCTCCCTCCCGCCCCCAGGCCCGACC
GCCAGAGTGCGATTACATGTGCCAAGCAAAACGCATAGTAGCCCATCCCC
CCAACAAGCAAGAAACGGATCATCCCACCGCGACACACCAGGCAAACT
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