EY685487

Overview
NameEY685487
Unique NameEY685487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length999
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.806e-25
Identity = 58/98 (59.18%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTGR 435
            KV+FDV + GKP+GR+   LF   VPKTAENFRALCTGEKG G SGKPLHYKGS FHR IP FM   GDF   +GR  ESI      +++   K TG+
Sbjct:    8 KVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGK 105          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.806e-25
Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KV+FD+ I G PAG+IVM L+    PKTAENFRALCTGEKG+G+SGKPLH+KGS+FHR IP+FM   GDF   +G   ESI      +++  +K TG
Sbjct:    6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTG 102          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.665e-25
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 1
Query:  139 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +KV+FD+ I GK +GRIVM L+   VPKTA NFRALCTGE GIGKSGKPLH+KGS FHR IP+FM+  GDF   +G   ESI  +   +++  +K TG
Sbjct:    4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.252e-25
Identity = 54/81 (66.67%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            +VYFD+ I GK  GRI M L+   VPKTA+NFR+LCTGEKGIGKSGKPLHYKGS FHR I  FM+  GDF   DG   ESI
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESI 92          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.165e-25
Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KVYFD+ I G+PAGRIVM L+    P+TAENFRALCTGEKG+G +GKPLH+KGS FHR IP+FM   GDF   +G   ESI      +++  +K TG
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.066e-24
Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KV+FD+ I GK  GRIVM L+   VPKTAENFRALCTGEKG GKSGK LH+KGS FHR IP FM+  GDF   +G   ESI  +   +++  +K TG
Sbjct:    5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.393e-24
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +V+FD+ + G+PAGRIVM LF    P+TAENFRALCTGEKG G+SGKPLHYK S+FHR IP FM   GDF   +G   ESI      +++  +K TG
Sbjct:    5 RVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.179e-23
Identity = 54/97 (55.67%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KV+FDV I  +PAGR+ M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHR IP FM+  GDF   +G   ESI     ++++   K TG
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTG 119          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.540e-23
Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +V+FD+ ++G P GRI M LF    P TAENFRALCTGEKG+GK GKPLH+KGS FHR IP FM   GDF  ++G   ESI     ++++  +K TG
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.627e-23
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 1
Query:  133 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            I NKV+F ++    P GR+V  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR I +FM+  GDF    G   ESI
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESI 88          
The following BLAST results are available for this feature:
BLAST of EY685487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
CYP5_RHIOR2.806e-2559.18Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
CP19B_ARATH2.806e-2557.73Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYP3_CAEEL3.665e-2558.16Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPID_GIBZE6.252e-2566.67Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CP18C_ARATH8.165e-2557.73Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYP2_CAEEL1.066e-2458.76Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYPH_CATRO1.393e-2456.70Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYP1_CAEEL1.179e-2355.67Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CP18D_ARATH1.540e-2354.64Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPID_DICDI2.627e-2363.10Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685487 ID=EY685487; Name=EY685487; organism=Citrus sinensis; type=EST; length=999bp
GCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCC
ACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTC
AGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTAC
TTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCT
CTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCA
CAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCCCTCCACTACAAGGGA
AGTACCTTTCATAGGACCATTCCCAGCTTTATGCTCCACCGAGGTGATTT
CCCTCCTCAGGATGGAAGAGTGGAAGAGTCCATCCAAGAAAAGGGAGGGA
GGAACGACCACCGCCCCCAGAAGACCACCGGACGACAGCCAGCACGAAAA
GGGAGAAACTAACACAAGGCGCGGACGACGCCCCAGAACGACAGCCCGCG
CCCGCACAACCCGAGCCCCGCGACGGCGCAACCCGATCCATCGAGAGAAG
CAGCGCGCGCAAGAAGAAAGAGACGGAGCCATCGCGCGAACAACCACCCG
GATGCAGACCAGCAGCTGACCAGAAAGCGAGAAGACAAGAGAACAACAAC
CGAACCGACCACAGAACGAAGGCGAGAGGGGACGGACAACGGGGGGCACG
TACAACGGCCGAAGGAGGCGCGGCGGCAGCGGCGGCGCAGGGCAGAAGAC
GAAGGAGATAGACAAGAAGACCGACGCGGGGAAACTCACAGGAAACGCAG
CGCGAGCGCGCCTCAGCGACGCACGCACGGGAACGGACGAAGCGCGATGC
ACCGCCCCGGGCGGGGAACAGCGGAGAGCCAACAAAACCGAGAGCGCGCT
GGACCCGCGAAGCACCGCAGACGCGCAGCACAACGCCGTGACGACGAGCC
AGGAAAGACACGCAAACCACCGCATGGAGGACAAGAAGGACGAGGAAGA
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