EY685487

Overview
NameEY685487
Unique NameEY685487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length999
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.069e-16
Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  130 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            ++T KVYFD++I  +  GR+V GLFGK VPKT +NF AL TGEKG G       YK S FHR I  FM+  GDF   DG   +SI
Sbjct:   41 KVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI 118          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.396e-16
Identity = 46/83 (55.42%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS--GKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            K YFD+ I G P GRIV  L+   VPKTAENF  LC G+ G+ KS    PL YKGS FHR I  FM+  GDF   DG   ESI
Sbjct:    5 KAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESI 87          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.396e-16
Identity = 46/81 (56.79%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            +V+FD++  G+  GRIVM L    VPKTAENFRALCTGEKG G       YKGSTFHR IP FM   GDF   +G   +SI
Sbjct:    5 QVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSI 78          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.381e-16
Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  130 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            ++T KVYFD+ I  +  GR++ GLFGK VPKT +NF AL TGEKG G       YK S FHR I  FM+  GDF   DG   +SI
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI 118          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 2.381e-16
Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  130 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            ++T KVYFD+ I  +  GR+V+GLFGK VPKT +NF AL TGEKG G       YK S FHR I  FM+  GDF   DG   +SI
Sbjct:   41 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSI 118          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.381e-16
Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +V+FD+    +P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR IP+FM   GDF   +G   +SI      +++   K TG
Sbjct:   68 RVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTG 157          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 4.062e-16
Identity = 48/102 (47.06%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  127 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KE    V+FDV   G+P GRI M LF   VP+TAENFRALCTGEKG G       +K S FHR IP F+   GD    DG   +SI      +++   K TG
Sbjct: 3060 KETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTG 3154          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.305e-16
Identity = 45/88 (51.14%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  121 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR I  FM+  GDF   DG    SI
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASI 90          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.305e-16
Identity = 45/88 (51.14%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  121 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR I  FM+  GDF   DG    SI
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASI 90          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.305e-16
Identity = 45/88 (51.14%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  121 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR I  FM+  GDF   DG    SI
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASI 90          
The following BLAST results are available for this feature:
BLAST of EY685487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
PPIB_MOUSE1.069e-1652.94Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPID_CANGA1.396e-1655.42Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPIA_HEMPU1.396e-1656.79Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIB_HUMAN2.381e-1651.76Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_BOVIN2.381e-1652.94Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIA_DROME2.381e-1649.48Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
RBP2_HUMAN4.062e-1647.06E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPIH_MOUSE5.305e-1651.14Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPIH_HUMAN5.305e-1651.14Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN5.305e-1651.14Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685487 ID=EY685487; Name=EY685487; organism=Citrus sinensis; type=EST; length=999bp
GCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCC
ACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTC
AGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTAC
TTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCT
CTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCA
CAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCCCTCCACTACAAGGGA
AGTACCTTTCATAGGACCATTCCCAGCTTTATGCTCCACCGAGGTGATTT
CCCTCCTCAGGATGGAAGAGTGGAAGAGTCCATCCAAGAAAAGGGAGGGA
GGAACGACCACCGCCCCCAGAAGACCACCGGACGACAGCCAGCACGAAAA
GGGAGAAACTAACACAAGGCGCGGACGACGCCCCAGAACGACAGCCCGCG
CCCGCACAACCCGAGCCCCGCGACGGCGCAACCCGATCCATCGAGAGAAG
CAGCGCGCGCAAGAAGAAAGAGACGGAGCCATCGCGCGAACAACCACCCG
GATGCAGACCAGCAGCTGACCAGAAAGCGAGAAGACAAGAGAACAACAAC
CGAACCGACCACAGAACGAAGGCGAGAGGGGACGGACAACGGGGGGCACG
TACAACGGCCGAAGGAGGCGCGGCGGCAGCGGCGGCGCAGGGCAGAAGAC
GAAGGAGATAGACAAGAAGACCGACGCGGGGAAACTCACAGGAAACGCAG
CGCGAGCGCGCCTCAGCGACGCACGCACGGGAACGGACGAAGCGCGATGC
ACCGCCCCGGGCGGGGAACAGCGGAGAGCCAACAAAACCGAGAGCGCGCT
GGACCCGCGAAGCACCGCAGACGCGCAGCACAACGCCGTGACGACGAGCC
AGGAAAGACACGCAAACCACCGCATGGAGGACAAGAAGGACGAGGAAGA
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