EY685468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_YERPG (Recombination-associated protein rdgC OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rdgC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12 Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = -3 Query: 2 RSSVLSVRRWNSALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 331 R LS L+ PC SQ++ G+V+P G DA L H ++I RKEE+ILP V++ EQ RK+ K E+D +KDE++ + LPRAF R Sbjct: 14 REVSLSADEMEKQLSAFSFTPCGSQDMAKTGWVSPMGSHSDA-LTHTVNGQIVICVRKEEKILPSPVIKQELQDKIERLEGEQHRKLKKTEKDSLKDEVLHSLLPRAFSR 122
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_SHEON (Recombination-associated protein rdgC OS=Shewanella oneidensis GN=rdgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 2 SALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 298 +ALA PC SQ+++ +GF GK + + LVH + + LI KEE+ILP V+++ E+ RK+ KKE+D +KDEII + LPRAF R Sbjct: 24 TALADFTFSPCGSQDVSKFGFSNALGK-KGSTLVHSANNRHLICVTKEEKILPAQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFSR 121
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_PSYIN (Recombination-associated protein rdgC OS=Psychromonas ingrahamii (strain 37) GN=rdgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = -3 Query: 2 RPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 274 +PC SQ+++ G+V P GK + H++G +LI +KEE++LP V++D EQ R + KKE+D +K+EI+ LPRAF R Sbjct: 32 KPCGSQDISKLGWVFPMGKS-GSMYTHIAGKQILICLKKEEKMLPAGVIKDQLNERVEAIELEQGRALKKKEKDSLKEEIVMQLLPRAFSR 121
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_HALHL (Recombination-associated protein rdgC OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rdgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = -3 Query: 2 LATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 292 LA PC + E + GFV P G G APLVH + LL ++E ++LP +V+R+ + RKV K+ERD+I+DE++ +PRAF R Sbjct: 26 LAALAFTPCGALEPSRSGFVPPLGPG--APLVHAAAGSLLFCLQEETKLLPAAVIREAMDERIGAVEAAEHRKVRKRERDRIRDEVVTDLMPRAFSR 120
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_SODGM (Recombination-associated protein rdgC OS=Sodalis glossinidius (strain morsitans) GN=rdgC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.076e-12 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = -3 Query: 2 LSVRRWNSALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 319 LSV + L+ PC SQ++ G+V P G DA L H +L+ RKEE+ILP SVV+ +Q RK+ K ++D +KDE++ +PRAF R Sbjct: 18 LSVEQIEQQLSAFAFTPCGSQDMAKSGWVPPMGAKSDA-LTHSIPGHVLLCLRKEEKILPSSVVKQELEGKISKLENDQSRKLRKTDKDALKDELLHQLMPRAFSR 122
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_SERP5 (Recombination-associated protein rdgC OS=Serratia proteamaculans (strain 568) GN=rdgC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.055e-11 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = -3 Query: 2 RSSVLSVRRWNSALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 331 R L+ L+ PC SQ++ G+V+P G ++ L H ++I ARKEE+ILP V++ EQ RK+ K E+D +KDE++ + LPRAF R Sbjct: 14 REVALNADEMEKQLSAFAFTPCGSQDMAKTGWVSPMGSHSES-LTHAVNGQIVICARKEEKILPSPVIKQELQAKIERLEGEQHRKLKKTEKDALKDEVLHSLLPRAFSR 122
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_VIBPA (Recombination-associated protein rdgC OS=Vibrio parahaemolyticus GN=rdgC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.377e-11 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 2 LATKLAR----PCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 292 L T+LA PC SQ+ +G+V+ G+ D + HVS + +LI A+KEE++LP SV+++ ++ R + KKE+D +KD+I+ LPRAF R Sbjct: 22 LETQLAEFRFTPCGSQDKQKFGWVSAMGRHGDM-MTHVSENRILICAKKEEKMLPASVIKESLNAKVDAMEAQEGRPLKKKEKDNLKDDIVMDLLPRAFSR 121
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_SHESH (Recombination-associated protein rdgC OS=Shewanella sediminis (strain HAW-EB3) GN=rdgC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.799e-11 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 2 PCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 271 PC+SQ+++ +GF GK + LVH + + LI A KEE+ILP V+++ E+ RK+ KKE+D +K+EI+ LPRAF R Sbjct: 33 PCSSQDISKFGFSNALGK-QGQTLVHSASERHLICATKEEKILPSQVIKEALEDKVAQIEAEEDRKLAKKEKDAMKEEIVMTLLPRAFTR 121
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_VIBVY (Recombination-associated protein rdgC OS=Vibrio vulnificus (strain YJ016) GN=rdgC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11 Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 2 PCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 271 PC SQ+ +G+V+ G+ D + HVS D +LI A+KEE++LP SV+++ ++ R + KKE++ +K+EII LPRAF R Sbjct: 33 PCGSQDKQKFGWVSAMGRHGDM-MTHVSEDRILICAKKEEKMLPASVIKESLNTKVEAMEAQEGRPLKKKEKETLKEEIIIDLLPRAFSR 121
BLAST of EY685468 vs. ExPASy Swiss-Prot
Match: RDGC_VIBVU (Recombination-associated protein rdgC OS=Vibrio vulnificus GN=rdgC PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11 Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 2 PCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIR 271 PC SQ+ +G+V+ G+ D + HVS D +LI A+KEE++LP SV+++ ++ R + KKE++ +K+EII LPRAF R Sbjct: 33 PCGSQDKQKFGWVSAMGRHGDM-MTHVSEDRILICAKKEEKMLPASVIKESLNAKVEAMEAQEGRPLKKKEKETLKEEIIIDLLPRAFSR 121 The following BLAST results are available for this feature:
BLAST of EY685468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685468 ID=EY685468; Name=EY685468; organism=Citrus sinensis; type=EST; length=1020bpback to top |