EY685462

Overview
NameEY685462
Unique NameEY685462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.328e-24
Identity = 58/103 (56.31%), Postives = 66/103 (64.08%), Query Frame = -1
Query:  317 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 625
            Y+ G     +   +G     PRRIHHR SSLPS A HP  I C  GF   + S   NPN+LVGA+VGGPN  D FPD RSD+ HSEPATYINA +VG LAY A
Sbjct:  392 YLLGSNPMGMSYMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY-SGVANPNVLVGAVVGGPNLQDQFPDQRSDHEHSEPATYINAPLVGALAYLA 493          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN8_ARATH (Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.124e-23
Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = -1
Query:  317 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 625
            YI G+    +   +G  +  PRRIHHRGSS+PS + HP  I C  G   +F S NPNPN+LVGA+VGGPN  D FPD R  +  SEP TYINA +VG L YF+
Sbjct:  385 YILGDNPMGLSYMVGYGQKFPRRIHHRGSSVPSVSAHPSHIGCKEGSR-YFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLLGYFS 486          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.918e-23
Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = -1
Query:  326 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLA 625
            YI G+    +   +G     P+++HHRGSS+PS   HP  + C+ G   +++S+NPNPN  VGAIVGGP+ ND F D RSDYSH+EP TYINAA V  ++
Sbjct:  391 YILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHPAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARSDYSHAEPTTYINAAFVASIS 490          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.273e-23
Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = -1
Query:  326 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLA 625
            YI G     +   +G     P + HHRGSSLPS  + P+ I C+GG+  +++S  PNPN+ +GAIVGGPN +D + D +SDYSH+EP TYINAA +GP+A
Sbjct:  374 YILGNNPMKMSYMVGFGTKYPTQPHHRGSSLPSIQSKPEKIDCNGGYS-YYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINAAFIGPVA 472          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.243e-22
Identity = 56/106 (52.83%), Postives = 67/106 (63.21%), Query Frame = -1
Query:  308 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGK 625
            YI G+    +   +G     PRRIHHRGSS+PS     + + C  GF  +  +S+PNPNI VGAIVGGP+ ND F D+R D SHSEPATYINAA VG  A   G K
Sbjct:  392 YILGKNPLGMSYMVGFSTKFPRRIHHRGSSIPSIKVLSRKVTCKEGFSSWLPTSDPNPNIHVGAIVGGPDGNDQFSDNRGDSSHSEPATYINAAFVGACAAAMGQK 497          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = -1
Query:  317 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQ-NDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 625
            YI G+    +   +G     PRRIHHRGSSLPS A HP  I C GG   ++ S+ PNPN+LVGA+VGGP+   D FPD R+ +  SEP TYINA ++G LAYF+
Sbjct:  395 YILGDNPLRMSYMVGYGARFPRRIHHRGSSLPSVAAHPARIGCKGG-AAYYASAAPNPNLLVGAVVGGPSDATDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 497          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN4_ARATH (Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.617e-22
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = -1
Query:  317 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 625
            YI G+    +   +G     P++IHHRGSS+PS  +HP  I C  G   FF S+NPNPN+L+GA+VGGPN  D FPD R  +  +EP TYINA ++G L YF+
Sbjct:  385 YILGDNPMKMSYMVGYGSRFPQKIHHRGSSVPSVVDHPDRIGCKDGSRYFF-SNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLLGYFS 486          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.170e-22
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = -1
Query:  314 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAG 625
            YI G     +   +G     PR +HHRG+S+PS  +HP  I CD GF  + HS  P+ N+L GA+VGGP+  D F D R +Y+ +EP+TY NA +VG LA+FAG
Sbjct:  394 YILGANPAGMSYMVGFGARYPRHVHHRGASMPSVRDHPARIGCDEGFR-YLHSPEPDRNLLAGAVVGGPDAGDAFADGRDNYAQAEPSTYTNAPLVGALAFFAG 496          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN17_ORYSJ (Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.795e-21
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = -1
Query:  317 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGP-NQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 625
            YI G+    +   +G     P RIHHRGSSLPS A HP  I C  G   ++ S+ PNPN+LVGA+VGGP N +D FPD R+ +  SEP TYINA ++G LAYF+
Sbjct:  382 YILGDNPLRMSYMVGYGSRYPLRIHHRGSSLPSVAAHPAQIGCKAG-ATYYASAAPNPNLLVGAVVGGPSNTSDAFPDARAVFQQSEPTTYINAPLLGLLAYFS 484          
BLAST of EY685462 vs. ExPASy Swiss-Prot
Match: GUN18_ARATH (Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.345e-21
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = -1
Query:  326 YIRGEPNKNVHTWLGLDRISPRRIHHRGSSLPSWANHPQSIRCDGGFEPFFHSSNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLA 625
            YI G     +   +G     P + HHRGSSLPS  + P+ I C+GGF  +++   PNPN+  GAIVGGPN +D + D R+DYSH+EP TYINAA +G +A
Sbjct:  376 YILGNNPLKMSYMVGFGTKYPTQPHHRGSSLPSIQSKPEKIDCNGGFS-YYNFDTPNPNVHTGAIVGGPNSSDQYSDKRTDYSHAEPTTYINAAFIGSVA 474          
The following BLAST results are available for this feature:
BLAST of EY685462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
GUN3_ORYSJ1.328e-2456.31Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN8_ARATH1.124e-2353.40Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE... [more]
GUN_PHAVU1.918e-2350.00Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN20_ARATH4.273e-2350.00Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUN20_ORYSJ1.243e-2252.83Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN6_ORYSJ2.770e-2252.88Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_ARATH3.617e-2249.51Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g232... [more]
GUN4_ORYSJ6.170e-2247.12Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN17_ORYSJ1.795e-2151.92Endoglucanase 17 OS=Oryza sativa subsp. japonica G... [more]
GUN18_ARATH2.345e-2149.00Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-E08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685462 ID=EY685462; Name=EY685462; organism=Citrus sinensis; type=EST; length=970bp
GCCGCCCTTTTTTTTTTTTTTTACGTGATATGTTGCTTTCATTCAACTTT
AGAAAACAGTCCTACAATGTTTAATTGCGATGAAGATTGCATTCGTGATG
CTTAGATTTTATGATCATGATTCTTTTATCTTCTTTAGTGATAGAAAGAA
TCATGATCATTGCACGATACAAAGCCATCAGACACTAAACTAAAATACAA
GAAAACATTCAAATGCTTCACCAATCTTTCTGGTGGCACATGCCCCTTTA
GTGGGACAATATATCTACAAGAAGCAGCTGCAACAAAAGAGAATGTCATC
AACCGGATTTGCCCCCAGCAAAATATGCCAAGGGTCCAACCATAGCAGCA
TTGATATACGTAGCCGGTTCTGAGTGACTATAGTCGCTCCGATCATCCGG
GAACCCATCATTCTGGTTTGGGCCTCCGACGATGGCTCCGACTAAGATAT
TAGGGTTAGGGTTTGATGAGTGGAAGAATGGTTCGAATCCACCATCACAA
CGGATGCTTTGAGGGTGGTTTGCCCATGAGGGTAAAGAAGATCCTCTATG
ATGAATCCTCCTCGGGGAAATTCGGTCCAAACCCAACCATGTATGGACAT
TTTTATTGGGTTCCCCCCTAATATATAGTCCCCCCTGGTCTTTTTGCGAG
GGTTGGGGACTAACGCCAGGGTTGAGTACCATATTGGCCACGGTCTAAAA
TGAGGTTTCAGGGGCTCCTGTTTACCTTACCGTCAGGTTGGGACAAGAGA
GCGAAAGGCAATGATGACAAATAAAACGGGTGGCTAACAGCCGAACGTGA
CCCGAAACCGCCCCTCGGAGGGCGTTGGTGAACAGCTAGGCAGGGAAGGC
ACACGAAACGAACAACGGGCGGAAAGGGGGACGGATCCGCGGCGAGAGCA
TGAACACGCCAGAACACTCACAAATACGGGACACGGAAAGACGGAACCAC
CACCGATAACATCAAGCCGT
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