EY685436

Overview
NameEY685436
Unique NameEY685436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            +E+PTNP  +I D+  +A++A   G LL+VDN+  +P   +PL LGADIV+HSATK++ GHSDV+ G++    + L +EL+F+QN+ G  L P D W+ +RG+ T+ LR E     A++
Sbjct:  140 IETPTNPLLKITDLTLMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLVVTASKELGEELHFVQNSTGGVLGPQDSWLLMRGIKTLGLRMEAIDQNARK 258          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGA----LLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            +E+PTNP  ++ DI+K+A++   H A    +L+VDN+ +SP +S PL  GADIV+HSATK+I GHSDV+ GVLA   + L + L FLQNA G+  +PFD W+  RG+ T+ LR
Sbjct:  145 IETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLR 257          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP Q++ DI   A + H HG ++LV DN+ MSP   RPL LGADI M+SATK++ GHSDV+ G+++V  E L   L FLQN+ G+  +P DC++C RG+ T+ +R E
Sbjct:  156 IETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRME 267          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            +E+PTNP  ++  I  I  +A  HG   +VDN+  SP   RP+ LGAD+V+HS TK+I GHSDV+ G +    + L ++L FLQNA G+   PFDCW+ LRGV T+++R
Sbjct:  142 LETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVVGGAIMTSNDELYEKLKFLQNAAGAVPGPFDCWLVLRGVKTLSIR 250          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            VE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+ G L    E L +E  FLQN  G+   PFD ++ +RG+ T+ LR +   + A
Sbjct:  153 VETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENA 269          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            VE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+ G L    E L +E  FLQN  G+   PFD ++ +RG+ T+ LR +   + A
Sbjct:  153 VETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENA 269          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            VE+PTNP   I DI  I E+   H   +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+ G L    E L +   FLQN  G+  +PFD ++ +RG+ T+ LR +  ++ A
Sbjct:  153 VETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQAFGFLQNGAGAVPSPFDAYLTMRGLKTLVLRMQRHNENA 269          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+P+NP  +I D+ + A +A  HG L +VDN+  +P    PL LGADIV HS TK++ GHSDV+AG++    E LA+E+ F QNA G  L P D W+  RG+ T+ LR E
Sbjct:  140 LETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGLRME 250          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 54/109 (49.54%), Postives = 79/109 (72.48%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            VESP+NP  ++ DI  +AE+AHA GALL VDN   +P L +PL+LGAD+V+HSATK+I G    M GV+A +GE++ + + FL+ A G  L+PF+ W+ L+G+ T+ +R
Sbjct:  164 VESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVGFLRTA-GPTLSPFNAWLFLKGLETLRIR 271          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 53/112 (47.32%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI+  A++ H H   +L+VDN+ MS    RPL LGADI M SATK++ GHSDV+ G+++V  + L + L FLQN+ G+  +PFDC++C RG+ T+ +R E
Sbjct:  155 IETPTNPTLKLADIKACAQIVHKHKDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVTSDDLNERLRFLQNSLGAVPSPFDCYLCCRGLKTLQIRME 266          
The following BLAST results are available for this feature:
BLAST of EY685436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
MCCB_BACSU1.377e-2544.54Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
CYS3_YEAST1.377e-2550.44Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
CGL_HUMAN4.006e-2550.00Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
METB_HERAU5.232e-2547.71Probable cystathionine gamma-synthase (Fragment) O... [more]
METB_MYCTU6.833e-2547.86Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO6.833e-2547.86Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
METB_MYCLE1.522e-2446.15Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]
METB_HELPY5.784e-2447.75Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METZ_PSEAE9.867e-2449.54O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]
CGL_RAT9.867e-2447.32Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685436 ID=EY685436; Name=EY685436; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGTGGAAAGTCCAACCAACCCTCGACAACAAATTTGTGAC
ATTCGTAAAATTGCAGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGT
GGATAACAGCATTATGTCCCCTGTATTATCACGACCTCTGGAACTCGGAG
CAGACATTGTGATGCACTCGGCTACTAAATTTATAGCTGGACATAGTGAT
GTCATGGCAGGTGTGCTTGCTGTAAAAGGAGAAAGGTTGGCAAAAGAGTT
GTATTTTCTGCAAAATGCAGAAGGCTCTGGGTTAGCCCCATTTGATTGTT
GGATTTGTTTGCGAGGTGTCAACACCATGGCTTTACGAGGGGAGAACACC
CACGACACCGCTCAGCAACACCGCTCAATTCCTTGCTTCCAATAAGACAG
AGCCAAGGAGGGGGGGGCGAGAGCACCCTGAACCATGACACACGGAATAC
ACACCAACCGCAGAACCCCGCCGATGCAACACCAACATGTCCTGGCGCAA
CACGGGCGGCCCCCGCCCGCGACCCCCCCAGCACAACCCGGAGAAAAACA
AAACACACCGCAAAAAACACAACCGCCGCACAAAAACCGCACAAGAACAA
AAGACGCAACGACAGCACAGCAGCGAACGCCGACAGCCAGACAGAGCACC
GCACACACGCCACGGGGCGCGGCACCGGCCCGGCAAACCCCCAGGCACCT
ACACCTCCAACCAACACAGCCACCGGAGACCAGACAAGCCGAACCACACA
CCCAGACGCAACAAACACCGAAACCCGCAGGAAACCACGCGCAACGCAGA
CGACGAAGGCGGGCCCAAGGCGCACAACCCACGAGGGGGCACCCCCGACC
GACCCCCCCACAGCACGCCCCCATCCCACCGACTCAAGCGCC
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