EY685436

Overview
NameEY685436
Unique NameEY685436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_PIG (Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI   A++ H HG ++LV DN+ MS    RPL LGADI M+SATK++ GHSDV+ G++++  E L   L FLQN+ G+  +P DC++C RG+ T+ +R E
Sbjct:  156 IETPTNPILKMIDIEACAQIVHKHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSLNSETLHSRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRME 267          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI   A + H  G ++LV DN+ MSP   RPL LGADI M SATK++ GHSDV+ G+++V  ERL   L FLQN+ G+  +P DC++C RG+ T+ +R E
Sbjct:  156 IETPTNPVLKMIDIEACAHIVHKRGDIILVVDNTFMSPYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNCERLHNRLRFLQNSLGAVPSPLDCYLCNRGLKTLHVRME 267          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI   A++ H  G ++LV DN+ MS    RPL LGADI M SATK++ GHSDV+ G+++V  + L   L FLQN+ G+  +PFDC++C RG+ T+ +R E
Sbjct:  155 IETPTNPTLKLADIGACAQIVHKRGDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNSDDLNSRLRFLQNSLGAVPSPFDCYLCCRGLKTLQVRME 266          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI   A   H HG ++LV DN+ MS    RPL LGADI M+SATK++ G+SDV+ G++++  E L   L FLQN+ G+  +P DC++C RG+ T+ +R E
Sbjct:  156 IETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNGYSDVVMGLVSLNSESLHDRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRME 267          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.583e-21
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+P+NP  +I D+ + A +A  H  L +VDN+  +P    PL LG DIV H+ TK++ GHSDV+AG++    E LA+E  F QNA G  L   D W+  RG+ T+ LR E
Sbjct:  140 LETPSNPLLKITDLAQCASVAKEHNLLTIVDNTFATPYCQNPLLLGTDIVAHNGTKYLGGHSDVVAGLVTTNNEALAQEFDFFQNAIGGVLGLQDSWLLQRGIKTLGLRME 250          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.986e-21
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQ 365
            VESP+NP  ++ DI KI  +A   GA+ +VDN+ +SP L  PL LGAD+V+HS TK++ GHSDV+AGV+  K   +  EL +  N  G     FD ++ LRG+ T+  R E     AQ
Sbjct:  143 VESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQ 260          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20
Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK--ELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQ 365
            ESP NP   + DI  +A++A  HGA ++VDN+  +P L RPLELGAD+V+HSATK+++GH D+ AG++ V  + L     L  L++  G+ L+P D  + +RG+ T+ LR +     AQ
Sbjct:  157 ESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIV-VGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQ 274          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL2_CAEEL (Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19
Identity = 46/118 (38.98%), Postives = 74/118 (62.71%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGA--LLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            ESP+NP  ++ DI  + + A       +++VDN+ MSP   RP+ LGAD+V+HS TK+I GHSDV+ G +    +   + L+F+Q A G+  +PFDC++  RG+ T+ +R    ++ A
Sbjct:  147 ESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSITKYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYENA 264          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.632e-18
Identity = 46/113 (40.71%), Postives = 73/113 (64.60%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAH--AHGALLLVDNSIMSPVLSRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            +ESPTNP  ++ DI +I       +    ++VDN++MS +   PL+L  G D+V  SATK++ GH D+M GV+  K   +A +LYF+ N+ G+GL+P D W+ +RG+ T+ +R
Sbjct:  154 LESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVR 266          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            +E+P+NP   +CD+R++ E AHA GAL+ VDN++ +P+  RPLELGAD  + S TK + GH DV+ G +A +       +   +   G+   P + W+  R + T+ LR +    TA
Sbjct:  161 IETPSNPGLDVCDVRRLVEAAHAGGALVAVDNTLATPLGQRPLELGADFSVASGTKQLTGHGDVLLGYVAGRDAGAMAAVRRWRKIVGAIPGPMEAWLAHRSIATLQLRVDRQDSTA 277          
The following BLAST results are available for this feature:
BLAST of EY685436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CGL_PIG1.683e-2347.32Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=... [more]
CGL_MACFA2.871e-2349.11Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]
CGL_MOUSE4.897e-2347.32Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
CGL_BOVIN1.425e-2246.43Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]
METB_HELPJ4.583e-2144.14Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METB_ECOLI5.986e-2144.92Cystathionine gamma-synthase OS=Escherichia coli (... [more]
MEGL_PSEPU3.880e-2042.86Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
CGL2_CAEEL2.515e-1938.98Putative cystathionine gamma-lyase 2 OS=Caenorhabd... [more]
STR3_YEAST3.632e-1840.71Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]
CYSA_STRCO6.195e-1837.61Putative cystathionine gamma-lyase OS=Streptomyces... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685436 ID=EY685436; Name=EY685436; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGTGGAAAGTCCAACCAACCCTCGACAACAAATTTGTGAC
ATTCGTAAAATTGCAGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGT
GGATAACAGCATTATGTCCCCTGTATTATCACGACCTCTGGAACTCGGAG
CAGACATTGTGATGCACTCGGCTACTAAATTTATAGCTGGACATAGTGAT
GTCATGGCAGGTGTGCTTGCTGTAAAAGGAGAAAGGTTGGCAAAAGAGTT
GTATTTTCTGCAAAATGCAGAAGGCTCTGGGTTAGCCCCATTTGATTGTT
GGATTTGTTTGCGAGGTGTCAACACCATGGCTTTACGAGGGGAGAACACC
CACGACACCGCTCAGCAACACCGCTCAATTCCTTGCTTCCAATAAGACAG
AGCCAAGGAGGGGGGGGCGAGAGCACCCTGAACCATGACACACGGAATAC
ACACCAACCGCAGAACCCCGCCGATGCAACACCAACATGTCCTGGCGCAA
CACGGGCGGCCCCCGCCCGCGACCCCCCCAGCACAACCCGGAGAAAAACA
AAACACACCGCAAAAAACACAACCGCCGCACAAAAACCGCACAAGAACAA
AAGACGCAACGACAGCACAGCAGCGAACGCCGACAGCCAGACAGAGCACC
GCACACACGCCACGGGGCGCGGCACCGGCCCGGCAAACCCCCAGGCACCT
ACACCTCCAACCAACACAGCCACCGGAGACCAGACAAGCCGAACCACACA
CCCAGACGCAACAAACACCGAAACCCGCAGGAAACCACGCGCAACGCAGA
CGACGAAGGCGGGCCCAAGGCGCACAACCCACGAGGGGGCACCCCCGACC
GACCCCCCCACAGCACGCCCCCATCCCACCGACTCAAGCGCC
back to top