EY685436

Overview
NameEY685436
Unique NameEY685436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            +ESP NP     DI  +A  AHA GALL+VD++  SP L      GADIV++SATK+  GHSD+++GVL VK E  +++L   +   G+ +A  + ++ LR + T  +R
Sbjct:  143 LESPVNPYGTSSDIESLARRAHAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLSGVLVVKEEATSRQLKDDRIYLGTNVANLESFMLLRSLRTYEMR 251          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17
Identity = 44/116 (37.93%), Postives = 71/116 (61.21%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            ESPTNP  +  DI  ++++ H  G L+ +D +  +P+  + L LGAD+V+HSATK+I GH+DV+AG +     +L  E+  L +  G  L P   ++ +RG+ T+ LR +  + TA
Sbjct:  325 ESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCIC-GSLKLVSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLRVQQQNSTA 439          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_RHIL3 (Putative cystathionine beta-lyase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=metC PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGL--APFDCWICLRGVNTMALRGENTHDTA 362
            E+P +   ++ DI  I+ +AH HGA++++DN+  +PV  RPL+ G DI +H++TK+ +GHSD++ G ++   E   +    L+ A G  G+  AP D +  LRG+ TM LR E  +++A
Sbjct:  156 EAPGSNTFEMQDIPAISAVAHRHGAVVMMDNTWATPVYFRPLDHGVDISIHASTKYPSGHSDILLGTVSANAEHWER----LKEANGVLGICGAPDDAYQILRGLRTMGLRLERHYESA 270          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            E+P +   ++ D+  +A  A  H  +L  DN+  S  + RPL LGA + + + TK++ GHSD+M G +    E +AK L   Q A G  ++  D W+ LRGV TM +R
Sbjct:  160 EAPGSLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLMLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVR 267          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: YFHE_SCHPO (Uncharacterized trans-sulfuration enzyme C23A1.14c OS=Schizosaccharomyces pombe GN=SPAC23A1.14c PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALR 338
            +E+P NP     DI    E+A   GA+L+VD++   P +   L LGAD V+HSATK++AGHSDV+AGV A K      +L   +   G+ L P   ++ LR + T  LR
Sbjct:  157 LETPLNPLGIAFDIPFYKELAKKKGAILVVDSTFAPPPIQDALVLGADYVVHSATKYLAGHSDVLAGVTASKDRSKILDLKADRAYLGTILHPQQAFLLLRSLRTFPLR 265          
The following BLAST results are available for this feature:
BLAST of EY685436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
YHR2_YEAST6.849e-1742.20Uncharacterized trans-sulfuration enzyme YHR112C O... [more]
METB_ARATH8.945e-1737.93Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
METC_RHIL31.428e-1437.82Putative cystathionine beta-lyase OS=Rhizobium leg... [more]
METC_BORAV1.209e-1337.04Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
YFHE_SCHPO1.579e-1341.28Uncharacterized trans-sulfuration enzyme C23A1.14c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685436 ID=EY685436; Name=EY685436; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGTGGAAAGTCCAACCAACCCTCGACAACAAATTTGTGAC
ATTCGTAAAATTGCAGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGT
GGATAACAGCATTATGTCCCCTGTATTATCACGACCTCTGGAACTCGGAG
CAGACATTGTGATGCACTCGGCTACTAAATTTATAGCTGGACATAGTGAT
GTCATGGCAGGTGTGCTTGCTGTAAAAGGAGAAAGGTTGGCAAAAGAGTT
GTATTTTCTGCAAAATGCAGAAGGCTCTGGGTTAGCCCCATTTGATTGTT
GGATTTGTTTGCGAGGTGTCAACACCATGGCTTTACGAGGGGAGAACACC
CACGACACCGCTCAGCAACACCGCTCAATTCCTTGCTTCCAATAAGACAG
AGCCAAGGAGGGGGGGGCGAGAGCACCCTGAACCATGACACACGGAATAC
ACACCAACCGCAGAACCCCGCCGATGCAACACCAACATGTCCTGGCGCAA
CACGGGCGGCCCCCGCCCGCGACCCCCCCAGCACAACCCGGAGAAAAACA
AAACACACCGCAAAAAACACAACCGCCGCACAAAAACCGCACAAGAACAA
AAGACGCAACGACAGCACAGCAGCGAACGCCGACAGCCAGACAGAGCACC
GCACACACGCCACGGGGCGCGGCACCGGCCCGGCAAACCCCCAGGCACCT
ACACCTCCAACCAACACAGCCACCGGAGACCAGACAAGCCGAACCACACA
CCCAGACGCAACAAACACCGAAACCCGCAGGAAACCACGCGCAACGCAGA
CGACGAAGGCGGGCCCAAGGCGCACAACCCACGAGGGGGCACCCCCGACC
GACCCCCCCACAGCACGCCCCCATCCCACCGACTCAAGCGCC
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