EY685423

Overview
NameEY685423
Unique NameEY685423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 59/125 (47.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGTVGGRGTPSTLPLDAKTNRKNSAVNYFGP 490
            IA AFG MIF LVYCTA ISG HINP+ T  L L R +SL     Y+V   L   +C   FV   + S Y R GGGAN  A GY  G GL A+IIGT     T  +   D K N ++S V    P
Sbjct:   83 IAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLG-AICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAP 205          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            IA AFG MIF LVYCTA ISG HINP+ TF L L R +SL  A  Y++   L   +C    V   + + Y R GGGAN  + GY+ G GLAA+IIGT
Sbjct:   87 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLG-AICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGT 182          

HSP 2 Score: 22.3274 bits (46), Expect = 1.024e-17
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            F+AT LFLYIT
Sbjct:   47 FIATLLFLYIT 57          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            IA AFG MIF LVYCTA ISG HINP+ TF L L R +SL  A  Y++   L   +C    V   + + Y R GGGAN  + GY+ G GLAA+IIGT
Sbjct:   88 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLG-AICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGT 183          

HSP 2 Score: 22.3274 bits (46), Expect = 1.024e-17
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            F+AT LFLYIT
Sbjct:   48 FIATLLFLYIT 58          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 51/97 (52.58%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            IA AFG MIF LVYCTA ISG HINP+ TF L L R +SL  A  Y++   L   +C    V   + S Y R GGGAN  + GY+ G GL A+IIGT
Sbjct:   87 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLG-AICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGT 182          

HSP 2 Score: 22.3274 bits (46), Expect = 1.024e-17
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            F+AT LFLYIT
Sbjct:   47 FIATLLFLYIT 57          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGTVGGRGTPSTLPLDAKTNRKNSAVNYFGP 490
            IA AFG MIF LVYCTA +SG HINP+ TF L L R +SL  A  Y+V   L   +C    V   + + Y R GGGAN  + GY+ G GLAA+IIGT     T  +   D K N ++S V    P
Sbjct:   83 IAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLG-AICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAP 205          

HSP 2 Score: 22.3274 bits (46), Expect = 1.024e-17
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            F+AT LFLYIT
Sbjct:   43 FVATLLFLYIT 53          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.730e-17
Identity = 49/97 (50.52%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            I+ AFG MIF LVYCTA ISG HINP+ TF L L   +SL  A  YMV   L    C    V + + + Y R GGGAN+ + GY  G G+ A+IIGT
Sbjct:   82 ISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLG-ATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGT 177          

HSP 2 Score: 23.0978 bits (48), Expect = 1.730e-17
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:   19 FMATFLFLYITXL 57
            F+AT LFLY+T L
Sbjct:   44 FIATLLFLYVTVL 56          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.804e-17
Identity = 55/125 (44.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGTVGGRGTPSTLPLDAKTNRKNSAVNYFGP 490
            IA AFG MIF LVYCTA ISG HINP+ TF L L R +SL  A  YM+  + +  +C +      + S Y R GGG N  + GY  G  L A+IIGT     T  +   D K N ++S V    P
Sbjct:   85 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIA-QCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAP 207          

HSP 2 Score: 23.483 bits (49), Expect = 3.804e-17
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:   19 FMATFLFLYITXL 57
            F+AT LFLYIT L
Sbjct:   46 FIATLLFLYITVL 58          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.496e-15
Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            IA +FG MIF LVYCTA ISG HINP+ TF L L R +SL  A  YM+  + +  +C    V       Y + GGGAN  A GY  G    A++IGT
Sbjct:   78 IAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIA-QCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGT 173          

HSP 2 Score: 22.3274 bits (46), Expect = 1.496e-15
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            F+AT LFLYIT
Sbjct:   46 FIATLLFLYIT 56          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.620e-14
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            IA AFG +IF LVYCTA ISG H+NP+ TF ++L R +SL  A  Y +   +           +     Y R GGGAN  A GY+ G G+ A+++GT
Sbjct:   72 IAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGT 168          
BLAST of EY685423 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.873e-14
Identity = 42/97 (43.30%), Postives = 52/97 (53.61%), Query Frame = 2
Query:  116 IACAFGDMIFTLVYCTADISG*HINPSETFRLLLPRNLSLTTATFYMVVHRLSCCMCTS*FVGILK*SNYKRLGGGANVAAPGYTTGDGLAAQIIGT 406
            +A +FG  IF LVYCT  +SG HINP+ T  L   R LSL     Y+V   L          GI+K   Y  LGGGAN  + GY+    L A+I+GT
Sbjct:   85 VAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMK-RPYDALGGGANTVSDGYSAAGALGAEIVGT 180          

HSP 2 Score: 21.1718 bits (43), Expect = 9.873e-14
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 1
Query:   19 FMATFLFLYIT 51
            FMAT +FLY++
Sbjct:   50 FMATLIFLYVS 60          
The following BLAST results are available for this feature:
BLAST of EY685423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP24_ARATH8.996e-1847.20Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE1.024e-1752.58Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE1.024e-1752.58Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ1.024e-1752.58Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE1.024e-1746.40Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP26_ARATH1.730e-1750.52Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE3.804e-1744.00Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP1_ATRCA1.496e-1547.42Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ORYSJ4.620e-1443.30Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ9.873e-1443.30Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685423 ID=EY685423; Name=EY685423; organism=Citrus sinensis; type=EST; length=957bp
CCACGCTTCCGTGCATAGTTCATGGCTACCTTCTTGTTCCTCTACATCAC
TNGCCTTGACTGTCATGAGTGTCTCTAATTCTAACACCAACTGCTCCACT
GTACTCATCCAATGAATTGCTTGTGCCTTTGGTGACATGATCTTTACGCT
TGTTTACTGCACTGCTGATATCTCAGGATGACACATCAACCCATCAGAGA
CCTTCCGTCTGCTGCTACCTAGGAATCTTTCCCTGACAACGGCTACCTTC
TACATGGTCGTGCACCGCCTTAGTTGCTGCATGTGCACCTCCTAATTTGT
AGGGATTCTCAAGTGAAGTAACTACAAAAGGTTGGGTGGTGGAGCCAATG
TTGCTGCTCCCGGCTACACCACGGGTGATGGCCTTGCTGCTCAAATAATT
GGCACCGTGGGGGGGCGGGGTACACCGTCCACACTGCCACTCGATGCGAA
GACAAACCGCAAAAACTCTGCTGTCAACTACTTTGGCCCCACCTCTCATC
TGTATTACCTCTTATCACGAACACACAAGCCAACCGCCGCATAATAACAC
CGGCATACGCAAGGCCAAATCGGACTGGAACCACTCTCACCAATAACTAC
CACCCAAAGCCTCCATCACCTCACCTCTCACTAACACCCCCACCTCCACT
ATGAACACAACGACACACCAGAAAAACAGAACAAAAACACCAGGAAGAAT
GCCAATAATGCTCCGACACACAAAAGGCCAACCACGCATACACAAGGACG
CAGTCCCAAACCGCCACACCAACCCGACAGAACACACAAACCACTACCAA
CCGATCACAACATACTCAGATGACACCCATACACACAGAGCCTCCAGAAA
CTCCTCCAACAACGCAACTCAACCCACAATCAACACACACCATCCCATAC
AGCCAACAAATACGCAGCAAACCAAGAACATAATCACGCAGAAAACCTAA
CCACCCA
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