EY685422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 7.428e-78 Identity = 135/161 (83.85%), Postives = 153/161 (95.03%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPL+++G+Q YRALTV ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS +EVDEQM+NVQNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ+ATA Sbjct: 270 FAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATA 430
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.267e-77 Identity = 136/161 (84.47%), Postives = 152/161 (94.41%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPLTSRGSQQYRALTV ELTQQM+DAKNMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+Q+KNSSYF +W+PNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 270 FAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 1.267e-77 Identity = 136/161 (84.47%), Postives = 152/161 (94.41%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPLTSRGSQQYRALTV ELTQQM+DAKNMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+Q+KNSSYF +W+PNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 270 FAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_GIALA (Tubulin beta chain OS=Giardia lamblia PE=2 SV=3) HSP 1 Score: 288.886 bits (738), Expect = 2.823e-77 Identity = 137/159 (86.16%), Postives = 150/159 (94.34%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479 FAPLTSRGSQ YRALTVPEL QM+D KNMM A+DPRHGRYLTA+AMFRG+MSTKEVDEQM+N+QNKNSSYFVEWIPNN+K +VCDIPP GLKMA+TFIGNST IQE+F+RV EQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A Sbjct: 270 FAPLTSRGSQIYRALTVPELVSQMFDNKNMMAASDPRHGRYLTAAAMFRGRMSTKEVDEQMLNIQNKNSSYFVEWIPNNMKVSVCDIPPRGLKMAATFIGNSTCIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB8_PAPHA (Tubulin beta-8 chain OS=Papio hamadryas GN=TUBB8 PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.823e-77 Identity = 135/161 (83.85%), Postives = 152/161 (94.41%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPLTSRGSQQYRALTV ELTQQM+DA+NMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+QNKNSSYF +W+P+NVK+ VCDIPP GLKM++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 270 FAPLTSRGSQQYRALTVAELTQQMFDARNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQNKNSSYFADWLPHNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_ONCGI (Tubulin beta chain OS=Onchocerca gibsoni GN=TBB PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.815e-77 Identity = 135/161 (83.85%), Postives = 153/161 (95.03%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPLTSR +QQYRA+TV ELTQQ++DAKNMM A DPRHGRYLTA+A+FRG+MS K+VDEQM+N+QNKNS+YFV+WIPNNVK+ VCDIPP LKMA+TFIGNST+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+A Sbjct: 270 FAPLTSRSNQQYRAVTVAELTQQLFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKDVDEQMLNIQNKNSAYFVDWIPNNVKTAVCDIPPRDLKMAATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASA 430
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.073e-76 Identity = 137/161 (85.09%), Postives = 151/161 (93.79%), Query Frame = 3 Query: 3 FAPLTSRGSQQYR-ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 482 FAPLTSRGSQ+YR L+V ++TQQM+DAKNMM AADPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYF+EWIPNN+KS++CDIPP GLKM+ TFIGN+T IQEMFRRV EQFT MFRRK FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT Sbjct: 271 FAPLTSRGSQEYRQGLSVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 431
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB1_ECHMU (Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.830e-76 Identity = 135/159 (84.91%), Postives = 148/159 (93.08%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479 FAPLTSRGSQQYR LTV ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS KEVD+QM+N QNKNSSYFVEWIPNNVK+ VCDIPP GLKM+ TF+GN+T+IQE+F+RVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A Sbjct: 270 FAPLTSRGSQQYRVLTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDDQMLNAQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSVTFMGNTTAIQEIFKRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 6.952e-76 Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 419 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 408
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB1_BRUPA (Tubulin beta-1 chain OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.642e-75 Identity = 133/161 (82.61%), Postives = 149/161 (92.55%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 FAPL++R + YRAL V ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS +EVDEQM+ VQNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 270 FAPLSARDAAAYRALNVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMMQVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430 The following BLAST results are available for this feature:
BLAST of EY685422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685422 ID=EY685422; Name=EY685422; organism=Citrus sinensis; type=EST; length=932bpback to top |