EY685422

Overview
NameEY685422
Unique NameEY685422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 1.357e-71
Identity = 126/159 (79.25%), Postives = 146/159 (91.82%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPL SRGSQQYR++TV +LTQQM+D+KNMM A DP++GRYLTA+A FRGK+STKEVD+QMI +QNK S +FVEWIP+N+KS+VCDIPP G+KM++ FIGNSTSIQE+F+RV EQF AMFRRKAFLHWYTGEGMDEMEFTEAESNM DLVSEYQQYQDA
Sbjct:  270 FAPLGSRGSQQYRSMTVNDLTQQMFDSKNMMAACDPKNGRYLTAAAYFRGKISTKEVDDQMIEIQNKQSEHFVEWIPHNIKSSVCDIPPKGMKMSAAFIGNSTSIQELFKRVGEQFQAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVSEYQQYQDA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.772e-71
Identity = 126/159 (79.25%), Postives = 147/159 (92.45%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLTS+GS  +R+LTVPELTQQM+DAKNMM A+DPRHGRYLT +A+FRG++S KEV++QM +VQ KNSSYFVEWIPNNV++ +C IPP GLKM+STFIGNSTSIQE+F+RV +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+ A
Sbjct:  270 FAPLTSKGSHSFRSLTVPELTQQMFDAKNMMAASDPRHGRYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYEIA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_PHANO (Tubulin beta chain OS=Phaeosphaeria nodorum GN=tubA PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 2.314e-71
Identity = 125/160 (78.12%), Postives = 147/160 (91.88%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 482
            FAPLTSRG+  +RA+TVPELTQQM+D KNMM A+D R+GRYLT SA FRGK+S KEV++QM NVQNKNSSYFVEWIPNNV++ +C +PP GLKM++TF+GNSTSIQE+F+R+ +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A+
Sbjct:  270 FAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSVPPRGLKMSATFVGNSTSIQELFKRIGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 3.023e-71
Identity = 126/160 (78.75%), Postives = 146/160 (91.25%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 482
            FAPLTSRG+  +RA+TVPELTQQM+D KNMM A+D R+GRYLT SA+FRGK+S KEV++QM NVQNKNSSYFVEWIP NV++ +C IPP GLKM+STF+GNSTSIQE+F+R+ +QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+
Sbjct:  270 FAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIGDQFTRMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAS 429          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 5.156e-71
Identity = 124/159 (77.99%), Postives = 147/159 (92.45%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLT+RGSQQYRA+TVPELT QM+DAKNMM A+DPRHGRYLT +A FRGK+S KEV+E M++VQ+KNS+YFVEWIPNNV++  CDI P GLKM+ TFIGNST+IQ++F+R+++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV+EYQQYQ+A
Sbjct:  270 FAPLTARGSQQYRAVTVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIPNNVQTAHCDIAPRGLKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVAEYQQYQEA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 5.156e-71
Identity = 127/159 (79.87%), Postives = 146/159 (91.82%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLTSRG+  +RA++VPELTQQM+D KNMM A+D R+GRYLT SA+FRGK++ KEV++QM NVQNKNSSYFVEWIPNN+++ +C IPP  LKM+STFIGNSTSIQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct:  270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRDLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 5.156e-71
Identity = 125/159 (78.62%), Postives = 147/159 (92.45%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLTSRG+  +RA++VPELTQQM+D KNMM A+D R+GRYLT SA+FRGK++ K+V++QM NVQNKNSSYFVEWIPNNV++ +C IPP GLKM+STF+GN+T+IQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct:  270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKDVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNATAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.734e-71
Identity = 126/159 (79.25%), Postives = 147/159 (92.45%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLTSRG+  +RA++VPELTQQM+D KNMM A+D R+GRYLT SA+FRGK++ KEV++QM NVQ+KNSSYFVEWIPNN+++ +C IPP GLKM+STFIGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct:  270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.734e-71
Identity = 125/160 (78.12%), Postives = 147/160 (91.88%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 482
            FAPLTSRG+  +RA++VPELTQQM+D KNMM A+D R+GRYLT SA+FRGK+S KEV++QM N+Q+KN SYFVEWIPNN+++ +C IPP GLKM+STFIGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+
Sbjct:  270 FAPLTSRGAYSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQSYFVEWIPNNIQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAS 429          
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBB_GIBFU (Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 8.795e-71
Identity = 126/159 (79.25%), Postives = 146/159 (91.82%), Query Frame = 3
Query:    3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 479
            FAPLTSRG+  +RA++VPELTQQM+D KNMM A+D R+GRYLT SA+FRG+++ KEV++QM NVQNKNSSYFVEWIPNN+++ +C IPP GL M+STFIGNSTSIQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct:  270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGRVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRGLTMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428          
The following BLAST results are available for this feature:
BLAST of EY685422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
TBBN_GUITH1.357e-7179.25Tubulin beta chain, nucleomorph OS=Guillardia thet... [more]
TBB_PNECA1.772e-7179.25Tubulin beta chain OS=Pneumocystis carinii GN=TUB-... [more]
TBB_PHANO2.314e-7178.13Tubulin beta chain OS=Phaeosphaeria nodorum GN=tub... [more]
TBB_RHYSE3.023e-7178.75Tubulin beta chain OS=Rhynchosporium secalis PE=3 ... [more]
TBB_MELLI5.156e-7177.99Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3... [more]
TBB_ACRCO5.156e-7179.87Tubulin beta chain OS=Acremonium coenophialum GN=T... [more]
TBB2_COLGL5.156e-7178.62Tubulin beta-2 chain OS=Colletotrichum gloeosporio... [more]
TBB_CEPAC6.734e-7179.25Tubulin beta chain OS=Cephalosporium acremonium GN... [more]
TBB1_EMENI6.734e-7178.13Tubulin beta-1 chain OS=Emericella nidulans GN=ben... [more]
TBB_GIBFU8.795e-7179.25Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-A09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685422 ID=EY685422; Name=EY685422; organism=Citrus sinensis; type=EST; length=932bp
GATTCGCTCCCCTCACCTCTCGTGGATCACAGCAATACAGGGCTCTCACT
GTTCCTGAGCTCACTCAACAAATGTGGGATGCTAAGAACATGATGTGTGC
TGCTGATCCTCGACACGGTCGGTACTTGACTGCTTCTGCGATGTTCCGTG
GCAAGATGAGCACCAAGGAGGTTGACGAACAGATGATCAATGTGCAGAAC
AAGAACTCATCATACTTTGTTGAGTGGATTCCCAACAATGTGAAGTCTAC
TGTTTGTGACATCCCTCCGACTGGTCTCAAAATGGCATCCACCTTCATTG
GTAACTCCACCTCAATTCAGGAAATGTTCAGGAGGGTGAGTGAACAGTTC
ACTGCCATGTTCCGCAGAAAGGCTTTTCTGCATTGGTACACTGGAGAGGG
TATGGATGAGATGGAGTTTACCGAGGCAGAGAGCAATATGAACGATCTGG
TTTCTGAGTACCAACAGTATCAAGATGCAACTGCAGAGGAGGATTATGAG
TATGATGATGAAGAGGAACCACAAGAGGAAGTCCTATAATGTTTGATATA
TGATCTGTGGATTGCCGTTCAGTTTGTTCCATGTTAACTTGAGCAGTTGA
TGTCCTCCTTTTTCATTCTTCACGTATTTATCCGCCTTTTAAGGGGGACG
CATTACTTGGGTATTCGTATAAAGGTCATAACAGAAAACATCTTCATCAT
AAAAAGCTATAGAACAAAGACAAAGGCCACGTATACAACAACAACCCACC
ATACACACCACACACCCGAGTGAGAACCATATTAACTAAATTATCTCACT
TAAAATTATTGCAAAACACAACAAAGAAGAAAGAACAACGAAACGACGAC
AACATACAAATGATAGAGAAGCGCCGCCGCGAACGCCCGCCAGCGCCAAA
AAACGCGAAGTACAAACAAACCCACCGAGGCC
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