EY685422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.847e-44 Identity = 80/154 (51.95%), Postives = 116/154 (75.32%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 464 FAPL + QQ+ TV EL QQ++ + N++CA D R G+ LTA+ +FRG+MS +EVD+ M V+NKN + FV+WIPNN+K+ +CDIPP GLKM++TFIGN+T+IQ +F+R+ + +M RRKA LHWYTGEGM+E EF +A+ + ++ +Y+ Sbjct: 269 FAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27 Identity = 60/169 (35.50%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 +AP+ S + L+V E+T ++ NMM DPRHG+Y+ S M+RG + K+V+ + ++ K + FV+W P K + PPT + A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ TA Sbjct: 272 YAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETA 440
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27 Identity = 56/163 (34.36%), Postives = 94/163 (57.67%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + +++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFIHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26 Identity = 57/163 (34.97%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ NMM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT + A I NST+I E+F R+ ++F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26 Identity = 57/163 (34.97%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ NMM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT + A I NST+I E+F R+ ++F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26 Identity = 56/163 (34.36%), Postives = 94/163 (57.67%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + LTV E+T +++ NMM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAEKAYHEQLTVAEITNSVFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVAVIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26 Identity = 55/163 (33.74%), Postives = 95/163 (58.28%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26 Identity = 56/163 (34.36%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26 Identity = 58/169 (34.32%), Postives = 97/169 (57.40%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 +AP+ S + L+V ELT ++D +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP+ ++ A I N+T+I E+F R+ +F M+ ++AF+HWY GEGM+E+EF+EA ++ L +Y++ TA Sbjct: 272 YAPVISAEKAFHEQLSVAELTNTVFDPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAVIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEVEFSEAREDLAALEKDYEEVGAETA 440
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26 Identity = 56/163 (34.36%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434 The following BLAST results are available for this feature:
BLAST of EY685422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685422 ID=EY685422; Name=EY685422; organism=Citrus sinensis; type=EST; length=932bpback to top |