EY685422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.003e-23 Identity = 50/161 (31.06%), Postives = 90/161 (55.90%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 461 +AP+ S+ + + +V E+T ++ N M DP G+Y+ ++RG + T++V + V+NK + V+W P K +C PP+ + A + N+T+I + ++R+ ++F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y Sbjct: 273 YAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.228e-23 Identity = 50/163 (30.67%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP--------TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + A +V E+T ++ N M DPRHG+Y+ ++RG + + + ++ K + FV+W P K +C PP + A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.828e-23 Identity = 49/163 (30.06%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG--------LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + A +V E++ ++ + M DPR+G+Y+ ++RG + K+V + + ++ K + FV+W P K +C PP + A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YAPIVSAAKAAHEANSVQEISMSCFEPNSQMVKCDPRNGKYMATCLLYRGDVVPKDVHQAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSALSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.918e-23 Identity = 51/163 (31.29%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +A + S + L+VPE+T ++ N M DPR G+Y+ ++RG + K+V+ + ++ + S FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 147 YARIISAEKAYHEQLSVPEITNACFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 309
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.987e-22 Identity = 52/170 (30.59%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY--FVEWIPNNVKSTVCDIPPTG--------LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 482 +AP+ SR + +TV +T ++ KN+M P G+Y+ M+RG + KE + + N++++ S FV+W P K + + P +K + + N+T+I ++F R++ +F MF ++AF+HWY GEGM+E EF EA ++ L +Y+ +T Sbjct: 279 YAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAFVHWYVGEGMEEGEFAEARDDLLALEKDYESVSAST 448
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.595e-22 Identity = 54/162 (33.33%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 6 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 AP+ SR Y V ELT +++A NMM +PR G+Y+ + M+RG + KEV + + NV++K + FV+W P K V PT L + + I N+T+I ++F R++++F ++ ++A++H + EGM+E EF EA ++ L +Y + Sbjct: 271 APMISRQENYYHENNVAELTSSVFEADNMMAKCNPRDGKYIASCLMYRGDVVNKEVTDAVKNVKSKANIQFVDWSPCAFKIGVNSQKPTVLPDSEFAQVERSCAMISNNTAISQVFERMNDKFDLLYAKRAYVHHFVSEGMEEGEFAEAREDLAALEKDYTE 432
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.426e-22 Identity = 49/163 (30.06%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP--------TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + A +V E+T ++ N M DPRHG+Y+ ++ G + + + +++ K + FV+W P K +C PP + A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA + L ++Y++ Sbjct: 272 YAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREVLAALEADYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.426e-22 Identity = 51/163 (31.29%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L + ++ Sbjct: 272 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDLAALEKDCEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.426e-22 Identity = 48/163 (29.45%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP--------TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 ++P+ S + A +V ++T ++ N M DPR+G+Y+ ++RG + KE + ++ K + FV+W P K +C PP + A + N+T+I E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 YSPVISADKASHEANSVQDITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKETHAAVATLKTKRTIQFVDWCPTGFKIGICYQPPQQVPNGDLAKVNRAVCMLSNTTAISEAWSALDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.781e-22 Identity = 47/162 (29.01%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 6 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP--------TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 AP+ S + + +V E+T ++ N M DPR G+Y+ + ++RG + K+ + + ++ K + FV+W P K +C+ PP +K + + N+T+I + R+ +F ++ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 272 APIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDLAALEKDYEE 433 The following BLAST results are available for this feature:
BLAST of EY685422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685422 ID=EY685422; Name=EY685422; organism=Citrus sinensis; type=EST; length=932bpback to top |