EY685422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.056e-19 Identity = 49/169 (28.99%), Postives = 87/169 (51.48%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLK--------MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 485 +AP+ S + L+V ++T ++ N M DP G+Y+ ++RG + K+V+ + +V+ K FV+W P K + P ++ A + N+T+I E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y + TA Sbjct: 275 YAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTA 443
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.685e-19 Identity = 52/162 (32.10%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT---GLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 461 +AP+ + + L+V ELT ++D ++M D G++++ M+RG +S++EV+ + ++ +N+ FV W P + K + P T G AST I N T++ ++F++V++ F MF ++AF+H Y GEGM+E EFT+A ++ +L +Y Sbjct: 277 YAPIVTPEKAIRQTLSVQELTSSLFDPNSLMIQCDDINKGKFMSCCMMYRGDVSSREVNLAVSGIKKQNTVPFVGWCPCSFKCGINSQPATAVPGSSYASTARSACMIANHTAMCQVFQKVNQNFDLMFGKRAFVHHYVGEGMEENEFTDARQDLYELEVDY 438
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.507e-19 Identity = 48/151 (31.79%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY--FVEWIPNNVKSTVCDIPPT------GLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 416 +AP+ S+ ++ +TV +T ++ N+M P G+Y+ M+RG + KE + + N++N+ S FV+W P K + + PT G MA T + N+T+I ++F R++ +F M+ ++AF+HWY GEGM+E E Sbjct: 181 YAPVISKEKSEHENITVDAITNSVFSENNIMAKCQPHLGKYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.638e-18 Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMA-------STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 419 ++P+ S G + + +V E+T ++ N M DPR+G+Y+ ++RG + K+V ++ K + FV+ P K +C PPT + + + N+T+I E + +S +F ++ ++AF+HWY GEGM+E EF Sbjct: 273 YSPVVSAGKASHESNSVMEVTIVCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAVAATLKTKRTVQFVDLQPTGFKIGICYQPPTMVPNGDLAKVNRACMLSNTTAISEAWTALSHKFDLIYSKRAFVHWYVGEGMEEGEF 418
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 87 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 482 + + ADP+H YL + M RG + ++ + + K S FV W K+++C +PP G + + N+T ++ F + E+F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT Sbjct: 331 HQLLRADPKHSLYLACALMVRGNVQISDLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.801e-15 Identity = 46/168 (27.38%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS------------TFIGNSTSIQEMFRRVS-EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 467 +AP+ S + + V +LT Q ++ N M DPR+G+Y+ + ++RG ++ + + ++ K+S VEW P K + P + A + + N+T++ E + + +F M ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 273 YAPVISGFKSAHESFKV-QLTFQCFEPNNQMVVCDPRNGKYMAVALLYRGDAVPRDCNAAIAALKAKSSFNLVEWCPTGFKLGINYQKPMAVPAAPGDGGLAPVDRSVSMLSNTTAMPEAWSKTGITKFDLMSAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.012e-15 Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 87 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 482 + + ADPRH YL + + RG + ++ + + K + FV W K+++C +PP G + + N+T ++ F + E+FT ++++KA LH Y +GM+E FTEA S+++ L+ EY DAT Sbjct: 331 HQLIQADPRHSLYLACALIVRGNVQISDLRRNIERL--KPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSLSALIQEYSDL-DAT 460
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.436e-14 Identity = 39/135 (28.89%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 383 ++P+ S+ + L+V E+T ++ ++ M D R G+Y+ +FRG ++ K+ + NV+ K ++ FVEW P K + PT L A + N+T+I E ++R++ +F MF ++AF+H Sbjct: 246 YSPMLSKEKAAHEKLSVQEITNACFEPQSQMVRCDTRKGKYMACCLLFRGDVNPKDANTATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVH 380
BLAST of EY685422 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.366e-13 Identity = 45/171 (26.32%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 3 FAPLTSRGSQQYRAL---TVPELTQQMWDAKNMMCA---ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM---EFTEAESNMNDLVSEYQQYQDA 479 + P TS +Q +A+ TV ++ +++ KN + + RH Y++ + +G++ +V + ++ ++ +NS+ F+ W P +++ + P T K++ + N T+I +F+R Q+ + +R AF+ Y E M E EF EA + + DL+ EYQ + A Sbjct: 272 YTPFTSDKIEQAKAVRKTTVLDVMRRLLQPKNRLVSMPTTPSRHACYISILNIIQGEVDPTDVHKSLLRIRERNSATFIPWGPASIQVALTKQSPYVQTTHKVSGLMLANHTNIASIFKRTVAQYDQLRKRNAFMPQYQKEAMFEKNLDEFDEARATVQDLIEEYQACEKA 442 The following BLAST results are available for this feature:
BLAST of EY685422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685422 ID=EY685422; Name=EY685422; organism=Citrus sinensis; type=EST; length=932bpback to top |