EY685419

Overview
NameEY685419
Unique NameEY685419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685419 vs. ExPASy Swiss-Prot
Match: Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis GN=RF_0381 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.462e-11
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 2 
Query:    5 GRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCH 220
            G   LH+AVD G L++  LL+ + ADVNAK ++G T LHYAV  D  A+   L+   AD+  K+N G +P H
Sbjct: 1030 GETILHFAVDLGSLDLVSLLMVRGADVNAKTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSGETPLH 1101
The following BLAST results are available for this feature:
BLAST of EY685419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
Y381_RICFE6.462e-1145.83Putative ankyrin repeat protein RF_0381 OS=Rickett... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-A06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685419 ID=EY685419; Name=EY685419; organism=Citrus sinensis; type=EST; length=978bp
TGAGGGTCGTGCTCCATTGCATTGGGCTGTAGATCGTGGACACCTGAACA
TCTCTGAACTACTTGTTAGCAAGAATGCTGATGTAAACGCCAAGGACAAT
GAAGGACAAACTCCATTGCATTATGCTGTTGTATGTGATAGGGAAGCCAT
TGCTCAGTTTCTTGTGAAGCAAAATGCAGATATAGGCATGAAGGATAATG
ATGGCAATTCTCCTTGTCATGTCTGTGAGTCGGACTGGCCATGGATGCTA
CATGCTGCTAAAGGGACTGACTGATGGTTTGTTACATTGGCTTAAGTATT
TCTTGACAAATTCTGTGTGGTTGTACATGGCAGTATATAACCCTTTAACC
TCTTCTAATCGTAATGTTATATTATTAATATAGGGTAATATTTTCTCAGG
AGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAACAAAAAGAAAAAAAAAAAACTGAAACACGCCTACAA
GGGCCTAAGAAGATCACTCAGGACCGGCAACTTCAGTCGACTGGAATCCC
GTGCGACCTCGAGGAAGAGTGCGGGGCTTGTGGGTAGGCCTGAGGTTACT
GCGTCTATCTCGGATGCGAACCACCTGTCTCATGCAGAGAAAAGCGAGGA
GAGAGGCCCCGGCCCAACCTGCCTTTGCCGTGACCCCATCCCATAAAAGA
CGTGAAGATGCGAAACACGGCCCTCGCCTCGGCTAGGCGCAGTCGGACGA
GGAAGCGGGTGTCAAGCTCGAGAGGGGCTGGAAACACGGAGCGGGGCGAC
GGGCCCCGGACCGCGCACGGGTGTACGGTGCTGACGGCATGAACGGACAA
ACCCCATACTACCCGCCAGGGCACCGCATGGGAGGCGTCCTCGCTGCAAC
CGAACACCGCGCATACCGCGCTCCCACCGCGGACGGCCGACGGAACGCGA
CGGATTGCGAAAAAGCAGTAGGTACGAA
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