EY685414

Overview
NameEY685414
Unique NameEY685414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685414 vs. ExPASy Swiss-Prot
Match: FRIL1_RAT (Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 3.879e-11
Identity = 40/133 (30.08%), Postives = 65/133 (48.87%), Query Frame = 1 
Query:   40 SAYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRV 438
            ++Y Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AME                H + +   D  L DF+ES +L ++V+ IKK+  ++  LRRV
Sbjct:   27 ASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRV 155
[Close]
BLAST of EY685414 vs. ExPASy Swiss-Prot
Match: FRIL_HORSE (Ferritin light chain OS=Equus caballus GN=FTL PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 5.067e-11
Identity = 44/150 (29.33%), Postives = 75/150 (50.00%), Query Frame = 1 
Query:   40 SAYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRR-VGQ--GHGVWHFDQMLL 480
            ++Y Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AM+                H + +   D  L DF+ES +L E+V+ IKK+ +++  ++R VG   G G + F+++ L
Sbjct:   27 ASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQD----EWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEYLFERLTL 172
The following BLAST results are available for this feature:
BLAST of EY685414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
FRIL1_RAT3.879e-1130.08Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl... [more]
FRIL_HORSE5.067e-1129.33Ferritin light chain OS=Equus caballus GN=FTL PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-018-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685414 ID=EY685414; Name=EY685414; organism=Citrus sinensis; type=EST; length=992bp
GATCCGCAGGACGGTCGGGATTCCGGGTCGACCCACGCGTCCGCCTATGT
GTATCATGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGG
GTCTCGCCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCT
GAGAAATTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCA
ATCAATATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATG
CTTTGTATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAG
AAACTCCTCAACTTGCACAAGGTGGCCAACAAGAACCATGATGTGCAGTT
GGCAGATTTCGTTGAAAGCGAGTATTTACATGAGCAGGTAGAAGCCATCA
AAAAGATATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGCCAGGGGCAT
GGTGTCTGGCACTTTGATCAAATGCTGCTCCATGGGGAGGAAGTCGTCGC
ATGATGGTGGACACATCTTGCTTGTCACCTGACTATCCCTACTAAGGCTT
GATCTTTATGTTGTTTTTGTTTTTTTGTTCACTAGTTCTTAATTTAGAAA
CTTTCAGGCATGGCATTAGTGCAGAAACTTTTACATTTGTGTTGATAGAT
GGAATGGCATATGGGGTAACATCAGGCTTAACTGACTTTTCTTTTCCTGG
TAGGAGTCCCCTCAAAGTTCAACCTTGAAATTTGGGGGGAAATATATAAT
AGAATACTGCTTCTTGCATTAACAAAAAACGCAAAAAACAAAAAGGGCAG
CCGGGTCTAAAGGAACCAACTATACGTTAGCCTGATTTGTAAAGTCAAGA
GCCTCTGCACGCGTCAACCAATAACAGCTCCCAGCGCGGGCGGTTTTAAC
CAACGAAGCCCCTGGGACAAGCCGCGGCCGGAACCAAACTACCCCCCCTT
CGCAACCATTTTCCCCTCCTTCCCGGGATCGGCGTTTTACAC
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