EY685363

Overview
NameEY685363
Unique NameEY685363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685363_ssr470 microsatellite EY685363_ssr470:470..481. BLAST: Citrus ESTs to Prunus persica proteins V1
EY685363_ssr952 microsatellite EY685363_ssr952:952..963. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.193e-49
Identity = 100/229 (43.67%), Postives = 147/229 (64.19%), Query Frame = 2
Query:   47 QYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAPLLYQTGLMESGFSLNDPQDFASPNLPPVKSSLKLTPDAAVGE 721
            +Y+S MK  QK  +YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E KE F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANME+IM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    LL++T L+ SGFSL DPQ  ++     +K  L    D    E
Sbjct:  344 KYVSHMKETQKSTYYITGESKEQVANSAFVERVRKQGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKEKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNHIYHMIKLGLGTDEDEVAAE 571          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.938e-48
Identity = 102/237 (43.04%), Postives = 153/237 (64.56%), Query Frame = 2
Query:   32 LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAPLLYQTGLMESGFSLNDPQDFASPNLPPVKSSLKLTPDAAVGE 721
            +TSLDQY+ RMK  Q  I+++ GA++++ E SPF+ERL KK YEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWSANMERIM++   QT  D++K  Y   ++  EINPRHP+I+++  R+ +D  D  V   A +L++T ++ SG+ L D + +       V+ SL + PDA V E
Sbjct:  440 ITSLDQYVERMKEKQDKIYFMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSANMERIMKAQAYQTGKDSTK--YYASQKTFEINPRHPLIRDML-RIKED--DKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDPDAKVEE 671          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 6.546e-48
Identity = 94/221 (42.53%), Postives = 149/221 (67.42%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAPLLYQTGLMESGFSLNDPQDFA 658
            S  S   L SL+ YI++M   QK+I++ITG +K+ +E SPFLE  + K ++V+F  DP+DEY +  L ++E KK  N++K+GL+L +  ++K    +L++ ++E  K  K  +  + V+ V VSN++  +PC++ T +YGWSANMERIM++Q L D S  AYM  ++  EINP+ PII EL+++V ++  ED  V+  A +LY+T L+ SGF+L+DP  +A
Sbjct:  442 SLNSPDDLISLEDYITKMPEHQKNIYFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLK-TILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYETALLSSGFTLDDPSAYA 661          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 8.550e-48
Identity = 102/222 (45.95%), Postives = 148/222 (66.67%), Query Frame = 2
Query:    8 YSTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAPLLYQTGLMESGFSLNDPQDFA 658
            YSTKS  ++TSL  Y++RM   QK+I+YITG + + +EKSPFL+ LK KN+EV+F  DP+DEY M  L ++EDKK  +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D +  +YM  K+  EI+P  PIIKEL+++V  D  ED  V+    LL+ T L+ SGF+L++P +FA
Sbjct:  443 YSTKSSEEMTSLSDYVTRMPEHQKNIYYITGESIKAVEKSPFLDALKAKNFEVLFMVDPIDEYAMTQLKEFEDKKLVDITKDFELEESDEEKAAREKEIKE-YEPLTKALKDIL-GDQVEKVVVSYKLVDAPAAIRTGQFGWSANMERIMKAQALRDTTMSSYMSSKKTFEISPSSPIIKELKKKVETDGAEDKTVKDLTTLLFDTALLTSGFTLDEPSNFA 662          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.235e-46
Identity = 103/222 (46.40%), Postives = 148/222 (66.67%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAPLLYQTGLMESGFSLNDPQDFAS 661
            STKS  +LTSL  Y++RM   QK+I+YITG + + +EKSPFL+ LK KN+EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+    LLY+T L+ SGFSL++P  FAS
Sbjct:  447 STKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKEIL-GDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFAS 666          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 4.691e-46
Identity = 102/222 (45.95%), Postives = 147/222 (66.22%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAPLLYQTGLMESGFSLNDPQDFAS 661
            STKS  +LTSL  Y++RM   QK+I+YITG + + +EKSPFL+ LK KN+EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+    LL++T L+ SGFSL +P  FAS
Sbjct:  443 STKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKDIL-GDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTNLLFETALLTSGFSLEEPTSFAS 662          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 1.156e-44
Identity = 101/248 (40.73%), Postives = 152/248 (61.29%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAPLLYQTGLMESGFSLNDPQDFASPNLPPVKSSLKLTPDAAVGEGKDVQK 739
            STKS  + TSL  Y++RM   QK I+YITG + + + KSPFL+ LK+KN+EV+F  DP+DEY    L +++ KK  +++K    E  +  K  ++KE KE ++ L K  K  L  + V+ V VS++L  +PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+  IIKEL+++V  D E D  V+    LL++T L+ SGF++ +P  FA      V   L +  +A   E K  ++
Sbjct:  444 STKSGDEATSLADYVTRMPEHQKQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDITKDFELEETEEEKAEREKEEKE-YENLAKSLKNIL-GDKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERIHKLVSLGLNIDEEAETTEEKATEE 689          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.971e-44
Identity = 94/221 (42.53%), Postives = 145/221 (65.61%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAPLLYQTGLMESGFSLNDPQDFA 658
            STKS  + TSL  Y++RM   QK+++YITG + + + KSPFL+ LK+K +EV+F  DP+DEY M  L ++E KK  +++K+  +L +  ++K+ +E+    +  L K  K  L  + V+ V VS++L   PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+ PIIKEL+++V  D E D  V+    LL++T L+ SGF++ +P  FA
Sbjct:  439 STKSGDEQTSLSDYVTRMPEHQKNMYYITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDITKD-FELEETEEEKKQREAEEKEYDGLAKALKNVL-GDKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQLLFETSLLVSGFTIEEPAGFA 657          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.669e-43
Identity = 95/222 (42.79%), Postives = 147/222 (66.22%), Query Frame = 2
Query:   11 STKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAPLLYQTGLMESGFSLNDPQDFAS 661
            STKS  + TSL  Y++RM   QK++++ITG + + +EKSPFL+ LK KN+EV+F  DP+DEY  Q L ++E K+  +++K    E  +  K  +++E+KE F+ LT   K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D++  +YM  K++ EI+P+  IIKEL++RV  +  +D  V+    LLY+T L+ SGF+L +P  FA+
Sbjct:  442 STKSVDEQTSLADYVTRMPEHQKNVYFITGESIKAVEKSPFLDALKAKNFEVLFLVDPIDEYAFQQLKEFEGKQLVDITKDFELEESEEEKKQREEEIKE-FEPLTAALKEVL-GDQVEKVVVSYKLIDAPAAIRTGQFGWSANMERIMKAQALRDSTMSSYMASKKIFEISPKSAIIKELKKRVEDNGAQDRTVKDLTSLLYETALLTSGFTLEEPASFAT 661          
BLAST of EY685363 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 6.141e-38
Identity = 84/219 (38.36%), Postives = 141/219 (64.38%), Query Frame = 2
Query:   20 SDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDK-KFQNVSKEGLKLGKDTKD----KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAPLLYQTGLMESGFSLNDPQDFA 658
            S  +LT+   Y+ RMK GQ  I++ITG +K+ +E SP +E+  KK YEV+F  DP+DEYL+  L  ++DK KF N+++ G+K  +D ++    K+  E FK L  + K  L S+ ++ V +S  L ++P ++V++ +G +AN ERIM++Q    A+ Q     K+++EINP HP+IK+L  R+ +   ED   + +A +LY+T  + +G+S+++P +FA
Sbjct:  497 SKEELTTFAGYVERMKEGQDQIYFITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTL-SDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQA-HQANAQPQFNSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYETSALTAGYSIDNPTNFA 713          
The following BLAST results are available for this feature:
BLAST of EY685363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
H90B3_HUMAN1.193e-4943.67Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
ENPL_RABIT2.938e-4843.04Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HSP90_SCHPO6.546e-4842.53Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_CANAL8.550e-4845.95Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_YEAST1.235e-4646.40ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST4.691e-4645.95ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_ASPFU1.156e-4440.73Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP90_PODAN1.971e-4442.53Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP82_ASHGO1.669e-4342.79Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
ENPL_DICDI6.141e-3838.36Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-018-C06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685363 ID=EY685363; Name=EY685363; organism=Citrus sinensis; type=EST; length=972bp
ACTCTCTTATAGCACAAAGTCAGATGGTAAATTGACTAGTCTGGACCAAT
ACATTTCAAGAATGAAAGCTGGACAAAAGGACATCTTTTACATTACAGGC
GCCAACAAGGAACAGTTGGAAAAGTCTCCATTCCTGGAGAGGCTTAAGAA
GAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGA
TGCAATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCCAAA
GAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTC
ATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACG
TGGATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTT
GTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTC
TCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGG
TGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGA
GTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCCACTCCT
TTACCAGACGGGACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCCAGG
ATTTTGCCTCCCCCAATTTACCGCCGGTGAAATCTAGCCTTAAATTAACC
CCTGATGCAGCGGTTGGGGAAGGAAAAGATGTACAAAAAACTTGATGCTG
ACCCGGAAAGGAAATAATCCTTCGGCTGCCAAAAAAAAACGGCAACCCAA
AGTAATCTGGCCACGGATGCAGTGTAAATTAGCCACATCACATCAATGGC
GCAACCACTCCCCGTTTTATTAGCAAAAGGTAACAGCGCACCGGCCTAAC
GCCGCGGGTTTTCAACATGGGCAAAACAGCAACGCAAACAAACGACCTAC
TAACAAACAAACAAACGCCACA
back to top