EY685356

Overview
NameEY685356
Unique NameEY685356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.987e-43
Identity = 95/193 (49.22%), Postives = 126/193 (65.28%), Query Frame = 3
Query:    9 AFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRAD 566
            A+V+G P    ++WH+Y A+        P+ TLEMCMTGLD+++ASVF+KT+     S A  MT+ SGI  I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D   +    L++RVL CF P+EFSVA+ +   G  H  T+  +L    Y C   + +EL   G LIY SF   +
Sbjct:  158 AYVIGDPAKPGQKWHIYYATQHPEQ---PMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATE 346          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.780e-43
Identity = 95/193 (49.22%), Postives = 126/193 (65.28%), Query Frame = 3
Query:    9 AFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRAD 566
            A+V+G P    ++WH+Y A+        P+ TLEMCMTGLD+++ASVF+KT+     S A  MT+ SGI  I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D   +    L++RVL CF P+EFSVA+ +   G  H  T+  +L    Y C   + +EL   G LIY SF   +
Sbjct:  158 AYVIGDPAKPGQKWHIYYATQHPEQ---PMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATE 346          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.869e-42
Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = 3
Query:    9 AFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFS 557
            A+V+G P    ++WH+Y A+ +      P+ TLEMCMTGLD+ +ASVF+KT+     S A  MT+ SGI  I+P+ E+CDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E  G D   +    +++RVL CF P+EFSVA+ +   G  H  T+   LD + Y C   + +EL   G LIY SF+
Sbjct:  151 AYVIGDPAKPGQKWHIYYATEQPEQ---PMVTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAV-TIFGGRGHAATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFA 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.347e-42
Identity = 93/193 (48.19%), Postives = 124/193 (64.25%), Query Frame = 3
Query:    9 AFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESS----AAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD 566
            A+V+G P    ++WHV+ A+        P+  LEMCMTGLD+K+A VF+KTN       A  MT+ SGI +I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E +G D   +    L++RVL CF P+EFSVA+ +   G  H  T+   L  + Y C   + +EL   G L+Y SF  A+
Sbjct:  158 AYVIGDPARPGQKWHVFYATEYPEQ---PMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAV-TIFGGRGHAGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAE 346          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18
Identity = 63/190 (33.16%), Postives = 92/190 (48.42%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASAEAGSHVNPV-YTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGD---TFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD 566
            A+VMG   N   W++Y A       +     T E+ M  LD      F+K    SA   T +SGI  +LP S I DF+FDPCGYSMN +  +   TIH+TPE   SY SF+    +  +     LL +VL  FKP  F+ AL+++  G   GD    F +++  Y+   K          ++  ++ + D
Sbjct:  171 AYVMGDV-NKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT---NVALADYNQLLAKVLNVFKPGRFTAALYAE-DGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLD 355          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASA------------EAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSI-EGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSD 440
            ++ +GS  N + W++Y+ S             E     +P  T+E+ M  LD +  S+FYK   + A   T  SGI  ILP   I DF FDPCGYSMN I +     TIH+TPE+ FSY SFE    +  +     L+ +V+  FKP +F V + ++
Sbjct:  143 SYCLGSM-NLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET---NVALSNYRKLINQVINTFKPGKFIVTIFAN 295          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 6.023e-16
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 431
            A+ MG   N+  W++Y+        +N P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  146 AYCMGRM-NSDCWYLYTLDLPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.023e-16
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 431
            A+ MG   N+  W++Y+        +N P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  146 AYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.867e-16
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 431
            A+ MG   N+  W++Y+        +N P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  146 AYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15
Identity = 52/143 (36.36%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    9 AFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 431
            A+ MG   N+  W++Y+        ++ P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  146 AYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
The following BLAST results are available for this feature:
BLAST of EY685356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM_ORYSJ1.987e-4349.22S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI5.780e-4349.22S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_HORCH2.869e-4248.95S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_MAIZE8.347e-4248.19S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM_DICDI6.435e-1833.16S-adenosylmethionine decarboxylase proenzyme OS=Di... [more]
DCAM_DROME4.171e-1736.31S-adenosylmethionine decarboxylase proenzyme OS=Dr... [more]
DCAM_RAT6.023e-1637.06S-adenosylmethionine decarboxylase proenzyme OS=Ra... [more]
DCAM_BOVIN6.023e-1637.06S-adenosylmethionine decarboxylase proenzyme OS=Bo... [more]
DCAM_MESAU7.867e-1637.06S-adenosylmethionine decarboxylase proenzyme OS=Me... [more]
DCAM_HUMAN2.289e-1536.36S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-018-B07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685356 ID=EY685356; Name=EY685356; organism=Citrus sinensis; type=EST; length=911bp
ACAGCACAGCTTTTGTCATGGGTAGTCCTGACAACACAAAGAGATGGCAT
GTTTACTCTGCCTCTGCTGAAGCAGGAAGCCATGTAAACCCAGTTTACAC
TCTAGAGATGTGCATGACTGGTTTGGACAGAAAGAGGGCATCTGTCTTCT
ACAAAACTAATGAAAGCTCAGCCGCTATGATGACCGAGGACTCTGGCATC
AGAAAGATTCTTCCAAAATCTGAGATTTGTGATTTTGAGTTTGACCCTTG
TGGTTACTCCATGAATAGTATTGAAGGGGATGCAGTATCTACTATCCACG
TCACACCTGAAGATGGTTTCAGTTATGCAAGTTTTGAGGCTGTGGGTTAT
GATTTTGAGGTTGTGAAGTTGACTCCCTTGCTTGAGAGGGTGCTTGCTTG
CTTCAAACCCGCTGAGTTTTCTGTTGCTCTGCATTCTGACATTGTTGGCG
ATGAACATGGAGACACCTTCATGCTGGACTTGAAGGGATATTCCTGTGGA
GAAAAGATATATGAAGAGCTCGGTAATAATGGTTCGCTGATCTACTACAG
CTTTTCAAGGGCTGATTGCTCCACAATCTCCTAAAGACAATCATTGAAAT
TGCTGTTGGAGCGAGGACGAGAAAGGACGAGGAAAGTAAGGGGAAATAGT
GCCCCGGATATAATATCGGGTTTTGTTTTTTCCATTTAATCCCTTCGCTT
ATAAAAATAAAATGGGGGGGGGGGTAATTTATGGTTGGCGCTTGAGCAAA
CCTTAACTTTTCCCAATAGCAGGATTATACCATGAGGGGGTGCGAACGAG
GAACGCATTTGAATAGCCGCCATACGACAAGGTGCGGAGATGATAAAACG
TGGACAAGCGACACAGCTGGCATACGCACGGGTGAGGCCGCGCGCCAGCC
ACGGACGGTGC
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