EY685355

Overview
NameEY685355
Unique NameEY685355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length963
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685355 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.829e-11
Identity = 77/299 (25.75%), Postives = 121/299 (40.47%), Query Frame = 2 
Query:    2 IQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY-----TNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYV--LRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP------VTGPPR---METSVINGT------YRGFMEVILQNN---DTKMHAYHMSGYAFFVVGMDYGGVDR*QPGAHINKGKGIAPP--TTPGLSLAHGTASWYSFDNVGIW 817
            I NH L + E +G YT       + +  GQ+ + LVT DQ        +         +++  + +A   Y      N    A+ P+    ND       M+  RS+    +    R      F    +NV +       NK      G+  A+++ ISF+ P   I  A + +++G + LDFPT P      V G P     +T   NGT      Y   +++I QN     T+ H  H+ G++F+V+G   G  D  Q  A  N      PP   T G+ +    A  +  +N G+W
Sbjct:  242 IANHRLTIVEVDGEYTKPYTTERVMLVPGQTMNILVTADQTVGRYSMAMGPYESAKNVKFQNTSAIANFQYIGALPNNVTVPAKLPI---FNDNIAVKTVMDGLRSLN---AVDVPRNIDAHLFITIGLNVNKCNSENPNNKCQGPRKGRLAASMNNISFIEPKVSILEAYYKQLEGYFTLDFPTTPEKAYDFVNGAPNDIANDTQAANGTRAIVFEYGSRIQIIFQNTGTLTTENHPIHLHGHSFYVIGYGTGNYD--QQTAKFNLED---PPYLNTIGVPVGGWAAIRFVANNPGLW 529
The following BLAST results are available for this feature:
BLAST of EY685355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAC6_ARATH4.829e-1125.75Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-018-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685355 ID=EY685355; Name=EY685355; organism=Citrus sinensis; type=EST; length=963bp
GATCCAAAACCATAATCTACTTCTAGCAGAGACAGAGGGATCATATACAG
TGCAACAGAATTATACTAGCTTAGATATACACGTAGGACAATCTTATTCG
TTTTTGGTAACCATGGATCAAAATGCTAGTACCGATTATTACATTGTTGC
AAGCGCAAGGTTTGTGAATGAATCACAATGGAAAAGAGTTACTGGTGTTG
CCATCTTGCACTATACAAATTCCAAAGGAAAGGCACGCGGTCCCCTCCCA
GAAGGACCAAATGATGAATTTGACAAAACCTTCTCCATGAACCAAGCAAG
ATCCATCAGATGGAATGTATCTGCAAGTGGTGCCCGTCCAAATCCACAGG
GTTCTTTTCGATATGGCTCAATCAATGTGACTGAAGTTTATGTGTTGAGA
AACAAGCCACCAGAAATGATTGACGGAAAACGGCGGGCAACTCTTAGTGG
AATATCGTTCGTTAATCCTTCCACCCCGATTAGACTAGCCGACTGGTTCA
AAGTGAAGGGAGCTTATAAGCTTGATTTTCCCACTAAGCCAGTTACAGGA
CCACCTCGGATGGAAACATCGGTAATTAATGGAACGTATAGGGGATTTAT
GGAAGTCATCCTACAGAACAATGACACCAAGATGCATGCATATCACATGA
GTGGTTATGCATTTTTTGTCGTCGGGATGGATTATGGTGGAGTGGACAGA
TAACAGCCAGGGGCACATATAAACAAGGGGAAGGGAATTGCCCCCCCCAC
AACCCCGGGTCTATCCCTGGCGCATGGAACTGCATCCTGGTATTCCTTTG
ACAATGTGGGGATCTGGAAATCTCAAAAAAAAAAAACTTTGACTCCGGGG
AATCTTGGCCCCAAAAAACCTTAACGTAAAAATAAGTCAATCCGGGAGGC
TACAAAAAAAAATTGGATTTTCCCCAACCCGGGAAAAGGGCCCCCTTTTT
GGGGGGGCCCCCC
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