EY685343

Overview
NameEY685343
Unique NameEY685343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8988 contig Csv1_Contig8988:40..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685343 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 63/217 (29.03%), Postives = 96/217 (44.24%), Query Frame = 3
Query:   45 LLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRV---DQNPNVIVGALVGGP-DWRDNFMDQRNNYMQTEACT-YNTAPLVGVFAKLSQLEEQRNSNP 680
            LLAKE  K++Y   ++      +Y+        NG  V  + GG+  +  W  ++Y +  AF+  +Y+ ++ D           V  Q    FA  Q++Y LG NP N SY+VG+G   P   HHR A                 + +W   +    +N +V+ GALVGGP    D + D R +Y+  E  T YN     G  + L+ L E+    P
Sbjct:  316 LLAKETGKQKY---IDDANRWLDYWTVGV----NGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA-----------------HGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYN----AGFSSALAMLVEEYGGTP 494          
BLAST of EY685343 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 3
Query:   36 ASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQ---NPNVIVGALVGGPDWRDNFMDQRNNYMQTE-ACTYNTAPLVGVFAKL 647
            A  LLAK  +K+ Y   +E   +  +++        NG+ V  T  GL ++  W ++++ +T AFL  +Y++          C    V   +   F KSQ+DY LGS     S++VGYG   P   HHR A                 + +W  ++     + + I GALVGGPD  D + D+ NNY+  E AC YN A   G  AK+
Sbjct:  300 AELLLAKLTNKQLYKDSIE---MNLDFWTTGV----NGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWE-------GCTPSKVSVYK--DFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTA-----------------HGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYN-AGFTGALAKM 471          
BLAST of EY685343 vs. ExPASy Swiss-Prot
Match: GUNB_CELFI (Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14
Identity = 60/217 (27.65%), Postives = 96/217 (44.24%), Query Frame = 3
Query:   45 LLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVD---QNPNVIVGALVGGP-DWRDNFMDQRNNYMQTEACT-YNTAPLVGVFAKLSQLEEQRNSNP 680
            LLA E  K++Y   ++      +Y+        NG  V  + GG   +  W  ++Y +  +F+  +YSD + D+ +    +           F   Q++Y LG NP + SY+VG+G   PT  HHR A                 + +W   +    Q+ +V+ GALVGGP    D + D R +Y+  E  T YN     G  + L++L E+    P
Sbjct:  304 LLAMETGKQKY---VDDANRWLDYWTVGV----NGQKVPYSPGGQAVLDSWGALRYAANTSFVALVYSDWMTDATRKARYH----------DFGVRQINYALGDNPRSSSYVVGFGANPPTAPHHRTA-----------------HGSWLDSITTPAQSRHVLYGALVGGPGSPNDAYTDSRQDYVANEVATDYN----AGFTSALARLVEEYGGTP 482          
BLAST of EY685343 vs. ExPASy Swiss-Prot
Match: GUNX_PRUPE (Endoglucanase CX (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 3
Query:   12 KYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYG 392
            K  G +V+       E+H +++    + Y+  +  YICS L   +      T GGLLY    +N+QYV++   LL  Y+  L  +     C    V  + ++S AK QVDYILG+NP  +SY+VG+G
Sbjct:  129 KETGTKVLLVSKSFLERHVEEF----QLYKAHSGNYICSLLPGTSNFQGQYTPGGLLYKASESNLQYVTSTTLLLLTYAKYLRTNGGVATCGSSKVTAETLISEAKKQVDYILGNNPAKISYMVGFG 251          
The following BLAST results are available for this feature:
BLAST of EY685343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GUN4_THEFU3.862e-1529.03Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUNG_CLOCE8.605e-1531.25Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUNB_CELFI3.270e-1427.65Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 ... [more]
GUNX_PRUPE1.243e-1334.65Endoglucanase CX (Fragment) OS=Prunus persica PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685343 ID=EY685343; Name=EY685343; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGAAGTATGCTGGCCTTCAAGTCATGGCTTCAAAGTTGCTT
GCAAAGGAACAACACAAGAAGCAATATGGATACATACTTGAACAGTATCG
ACTAAAAGCCGAGTACTATATTTGTTCATGCCTTAACAAGAACAATGGTA
GCAATGTAGACCGGACGCGGGGAGGTCTGTTATACATCAGGCCATGGAAC
AACATGCAGTATGTTTCAACAGCAGCATTTTTGCTCACCATCTACTCTGA
CTTGCTGCTTGACTCAAATCAACCGCTGAATTGCAATGGTGAAATTGTCG
GTCACCAAGAGATCCTTAGCTTTGCCAAGTCCCAAGTAGATTACATATTA
GGCTCTAACCCAATGAACATGAGCTATTTGGTGGGTTATGGACCCAAATA
CCCCACAAGGGTGCACCATAGAGGAGCCTCAATTGTGTCATACAGAGAGA
ACAAAGGGTTCATCGGGTGCACCCAAGGGTATGATAACTGGTACAGCCGG
GTGGACCAGAACCCGAATGTTATAGTTGGAGCTTTGGTTGGAGGACCCGA
TTGGCGAGATAATTTCATGGATCAAAGAAATAATTATATGCAGACTGAGG
CCTGCACATATAATACGGCACCATTGGTGGGAGTTTTTGCCAAATTGTCC
CAATTAGAGGAACAAAGGAATAGTAACCCATCCCTGGTTGCTTCATCTTA
AAGAATACATAGTCATTTGCGTTTTTTAAAAGCCTTTTTTTTTATGGGGG
GGGTGAACTAAAGGGTCCCAGCCCTCCTTTGGAAGCTTTCCTTCCGTTTG
GTTTTGTTTTTTTTTTTATAAGGTTTTTAAAAAAAAAAATTAAAAGTTTC
AAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGC
CTTAAGA
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