EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.477e-32
Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 1
Query:  133 GIDAGEEANGEDDFSDDGSQAG---EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR----EVTESINLNKETEGSCSNRSE 552
            G+   EE + ++D +  G + G   EKKRRL++EQV+ LE++FE  NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY  L++ Y+A++AD +AL+     L AEI  LK +    +   S +  KE E   ++ ++
Sbjct:   17 GVGVEEEMDVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDAD 163          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32
Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1
Query:  199 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR-------EVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTS---------RNLFPTKSTSSVRPTVAAQLFHNSSSS 708
            EKKRRL++ QVK LEKNFEL NKLEPERK++LA+ LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+  N+ L  EI  LK++       E  E  N    TE   S + E  S +   I+  P+       H            R+L P K+ +S     A     + SS+
Sbjct:   61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVS-LPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSA 245          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.931e-32
Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 594
            E+++ D+  Q  EKKRRL  EQV  LE++FE  NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+D+D LK  ++A++AD +AL   N +LH+++M+L     TE +   KET       +E S+   +D+   PA
Sbjct:   66 EEEYYDE--QLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL-----TEKLQ-EKET------TTEGSAGAAVDVPGLPA 195          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.931e-32
Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 594
            E+++ D+  Q  EKKRRL  EQV  LE++FE  NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+D+D LK  ++A++AD +AL   N +LH+++M+L     TE +   KET       +E S+   +D+   PA
Sbjct:   68 EEEYYDE--QLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL-----TEKLQ-EKET------TTEGSAGAAVDVPGLPA 197          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.321e-31
Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 1
Query:  148 EEANGEDDFSDDGSQAG--EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKE--TEG 531
            E+A   +++S +    G  EKKRRL ++QVK LEKNFEL NKLEPERK +LA+ LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+  N  L  EI  +K++   E  N N +  TEG
Sbjct:   39 EDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEG 170          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.726e-31
Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKET 525
            +DDF DD  Q  EKKRRL  EQV  LEK+FE  NKLEPERK QLA+ LGLQPRQVA+WFQNRRARWKTKQLE+DYDLLK  Y+ + ++ +++   N KL +E+ +L     TE +   +ET
Sbjct:   57 DDDFYDD--QLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL-----TEKLQGKQET 170          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.558e-31
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:  127 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            + G+    E + E++    G   GEKKRRL++EQV+ LE++FE+ NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY  L+  Y++++ D +AL+     L AEI  LK++
Sbjct:   27 YGGVGMEAEGDVEEEMMACGG-GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAK 146          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.558e-31
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:  127 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            + G+    E + E++    G   GEKKRRL++EQV+ LE++FE+ NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY  L+  Y++++ D +AL+     L AEI  LK++
Sbjct:   27 YGGVGMEAEGDVEEEMMACGG-GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAK 146          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.492e-30
Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 594
            E+++ D+  QA EKKRRL  EQV+ LE++FE  NKLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D LK  Y+A+ AD  AL + N +L A++++L     TE +  +KET  S +  +  + ++      T A
Sbjct:   75 EEEYYDE--QAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL-----TEKLQ-DKETSPSSATITTAAQEVDQPDEHTEA 210          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.492e-30
Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 594
            E+++ D+  QA EKKRRL  EQV+ LE++FE  NKLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D LK  Y+A+ AD  AL + N +L A++++L     TE +  +KET  S +  +  + ++      T A
Sbjct:   75 EEEYYDE--QAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL-----TEKLQ-DKETSPSSATITTAAQEVDQPDEHTEA 210          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX20_ORYSI3.477e-3249.66Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
ATHB6_ARATH4.541e-3244.62Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
HOX16_ORYSJ5.931e-3252.08Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI5.931e-3252.08Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
ATB16_ARATH1.321e-3155.30Homeobox-leucine zipper protein ATHB-16 OS=Arabido... [more]
HAT5_ARATH1.726e-3158.68Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
HOX4_ORYSJ6.558e-3154.55Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI6.558e-3154.55Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX5_ORYSJ2.492e-3050.00Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX5_ORYSI2.492e-3050.00Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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