EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28
Identity = 58/102 (56.86%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  196 GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTE 501
            GEKKRRL +EQV+ LE++F+  NKL+P+RK ++AR LGLQPRQVA+WFQNRRARWKTKQLE+D+  L+ +++A++AD +AL+     L AEI  L+ +  T+
Sbjct:   70 GEKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTK 171          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27
Identity = 65/129 (50.39%), Postives = 89/129 (68.99%), Query Frame = 1
Query:  139 DAGEEANGEDDFSDDGSQA-------GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQY-EAVKADREALQAQNQKLHAEIMALKSREVTE 501
            D  EE   ED      +Q+       GEKKRRL +EQV+ LE++F+  NKL+P+RK ++AR LGLQPRQVA+WFQNRRARWKTKQLE+D+  L+ Q+ +A++AD +AL+     L AEI  L+ +  T+
Sbjct:   44 DEEEEEVDEDMAGGHAAQSPSPSCGLGEKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTK 172          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.352e-26
Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 1
Query:  148 EEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            ++  G       G   GEKKRRL  EQV+ LE++FE  NKL+PERK ++AR L L PRQVA+WFQNRRARWKTKQ+E+D+  L+ +++A++ + +AL+     L AEI  L+ R
Sbjct:   47 DDGGGGGGGGGGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDR 160          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.352e-26
Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 1
Query:  148 EEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            ++  G       G   GEKKRRL  EQV+ LE++FE  NKL+PERK ++AR L L PRQVA+WFQNRRARWKTKQ+E+D+  L+ +++A++ + +AL+     L AEI  L+ R
Sbjct:   23 DDGGGGGGGGGGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDR 136          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  139 DAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            D  +E  G D+     S A  +KRRL  EQV+ LE++FE    KLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D L+  ++ + A R AL A N+ L ++++ L  +
Sbjct:   63 DLVDELYGVDE--QGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEK 178          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  139 DAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            D  +E  G D+     S A  +KRRL  EQV+ LE++FE    KLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D L+  ++ + A R AL A N+ L ++++ L  +
Sbjct:    3 DLVDELYGVDE--QGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEK 118          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24
Identity = 61/142 (42.96%), Postives = 82/142 (57.75%), Query Frame = 1
Query:  142 AGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSD 564
            AG      D     G   GE+KRR   EQV++LE  F     KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQ+E DY  L+ QY+A+ A  E+L+ +   L A++  L+ +     +N  ++  GSC        D
Sbjct:   45 AGRGGGDGDGGGGGGGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGK-----LNERQDQSGSCDGGGAEGDD 181          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24
Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 1
Query:  142 AGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSD 564
            A     G+ D    G   GE+KRR   EQV++LE  F     KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQ+E DY  L+ QY+A+ A  E+L+ +   L  ++  L+ +     +N  ++  GSC        D
Sbjct:   44 AAGRGGGDGDGGGGGGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGK-----LNERQDQSGSCDGGGAEGDD 180          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.259e-23
Identity = 56/112 (50.00%), Postives = 80/112 (71.43%), Query Frame = 1
Query:  205 KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCS 540
            +RR + EQ+K+LE  FE   +LEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE +Y++L++ Y+ + +  E+L+ + Q L +E+  LK  E T+     +E E  CS
Sbjct:   33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLK--EATQ--KKTQEEERQCS 140          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22
Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 1
Query:  151 EANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMAL 480
            +  G+      G  A ++K+R + EQ+K+LE  F    KLEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE++Y  L+  Y+A+    E+L+ +   L  ++  L
Sbjct:   13 DVGGKGGKGGGGGGAADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKL 122          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX13_ORYSJ8.863e-2856.86Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX13_ORYSI5.745e-2750.39Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX8_ORYSJ6.352e-2650.00Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX8_ORYSI6.352e-2650.00Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX25_ORYSJ7.023e-2550.85Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX25_ORYSI7.023e-2550.85Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX24_ORYSI2.669e-2442.96Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSJ3.485e-2442.25Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
ATHB7_ARATH2.259e-2350.00Homeobox-leucine zipper protein ATHB-7 OS=Arabidop... [more]
HOX6_ORYSJ1.912e-2246.36Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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