EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:145..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 1
Query:   67 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVA 678
            S +P     ++S  GKR        +G +    DD   DG+  G KK RL+ +Q   LE+ F+  + L P++K+ LA  LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  + + L    +K  A++ ALK+     S +  + +  + +  +   S  ++  +  P   +    HP S     + ST++    VA
Sbjct:   75 STSPDSAAALSSASGKRERELERSGSGVD----DDDGADGA-GGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRL----EKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAVA 269          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 1
Query:   67 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVA 678
            S +P     ++S  GKR        +G +    DD   DG+  G KK RL+ +Q   LE+ F+  + L P++K+ LA  LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  + + L    +K  A++ ALK+     S +  + +  + +  +   S  ++  +  P   +    HP S     + ST++    VA
Sbjct:   75 STSPDSAAALSSASGKRERELERSGSGVD----DDDGADGA-GGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRL----EKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAVA 269          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 65/203 (32.02%), Postives = 100/203 (49.26%), Query Frame = 1
Query:   88 HGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTES--INLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVAAQLF 690
            HG+       +    G   GE ++      D+G+ A  KK RL+ EQ   LE++F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR         E L  +N++LH E+  L++ +      ++L   T   C +    +S+     +  PA  +  +  PT+       S    RP+  A LF
Sbjct:  137 HGLRGHAEAAAQGGGGGGGGERSSSRASDDDEGASA-RKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC-------ETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAAARTAVASPEPHRPSSFAALF 331          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 57/138 (41.30%), Postives = 73/138 (52.90%), Query Frame = 1
Query:   91 GVASFLG---KRSMSFSGIDAGEEANG----------EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            G++SF     KR    SG D  EEA             DD  D+   +  KK RL  +Q   LE NF+L + L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D + LK+  E +  +   LQ + Q L A
Sbjct:   76 GISSFSSGRVKREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKA 213          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 1
Query:  187 SQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            SQ   KK+RL  +QV+ LEK F +  KLEP+ K+QL+  LGL  RQVA+WFQN+RAR+KT+ LE  +  L+ ++EA  +D+  L+ Q Q L  E+   +++
Sbjct:    6 SQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQ 106          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18
Identity = 63/188 (33.51%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  133 GIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTES--INLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVAAQLF 690
            G   GE ++      D+G+ A  KK RL+ EQ   LE++F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR         E L  +N++LH E+  L++ +      ++L   T   C +    +S+     +  PA  +  +  PT+       S    RP+  A LF
Sbjct:  152 GGGGGERSSSRASDDDEGASA-RKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC-------ETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAAARTAVASPEPHRPSSFAALF 331          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17
Identity = 60/148 (40.54%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   64 PSCAPQDFHGVASFLGKRSMSFSG-------IDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 486
            PSC+ +D    AS       S SG         A   A  +D+ S  GS+   KK RL+ +Q   LE  F+  N L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:  107 PSCSEEDEEPGASSPNSTLSSLSGKRGAPSAATAAAAAASDDEDSGGGSR---KKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTDENRRLHRELQELRA 244          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17
Identity = 60/148 (40.54%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   64 PSCAPQDFHGVASFLGKRSMSFSG-------IDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 486
            PSC+ +D    AS       S SG         A   A  +D+ S  GS+   KK RL+ +Q   LE  F+  N L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:  107 PSCSEEDEEPGASSPNSTLSSLSGKRGAPSAATAAAAAASDDEDSGGGSR---KKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTDENRRLHRELQELRA 244          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.193e-17
Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 1
Query:   67 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREV 495
            S +P    G      +  +  + + + E+ + E+   DDGS    KK RL  EQ + LE +F   + L P++K  LA+ L L+PRQ+ +WFQNRRAR K KQ E + + LKR +        +L  +N +LH E+  L++ +V
Sbjct:   94 SSSPLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWF-------GSLTEENHRLHREVEELRAMKV 229          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   67 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT 498
            +C+P     V+S  GKR    SG  +G+E   +D   D G     KK RL+ +Q   LE+ F+  + L P++K+ LA++L L+PRQV +WFQNRRAR K KQ E D + LKR  + +  D       N++LH E+  L++ + T
Sbjct:   56 ACSPGS--PVSSGSGKRG---SGSGSGDEV--DDAGCDVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADD-------NRRLHKELAELRALKAT 185          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX2_ORYSJ9.822e-1931.86Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX2_ORYSI9.822e-1931.86Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX27_ORYSI1.283e-1832.02Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HAT22_ARATH3.732e-1841.30Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]
ATB52_ARATH3.732e-1845.54Homeobox-leucine zipper protein ATHB-52 OS=Arabido... [more]
HOX27_ORYSJ6.367e-1833.51Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HOX1_ORYSJ1.086e-1740.54Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HOX1_ORYSI1.086e-1740.54Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
ATB17_ARATH9.193e-1734.97Homeobox-leucine zipper protein ATHB-17 OS=Arabido... [more]
HOX28_ORYSJ1.201e-1638.89Homeobox-leucine zipper protein HOX28 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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