EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   67 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT 498
            +C+P     V+S  GKR    SG  +G+E   +D   D G     KK RL+ +Q   LE+ F+  + L P++K+ LA++L L+PRQV +WFQNRRAR K KQ E D + LKR  + +  D       N++LH E+  L++ + T
Sbjct:   56 ACSPGS--PVSSGSGKRG---SGSGSGDEV--DDAGCDVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADD-------NRRLHKELAELRALKAT 185          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 64/198 (32.32%), Postives = 98/198 (49.49%), Query Frame = 1
Query:  133 GIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETE-----GSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSV-------RPTVAAQLF 690
            G   G+ +       DDG  A  KK RL+ EQ   LE++F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR         E L  +N++L  E+  L++ +      ++          SC   + NS+      + T +  +P +  P+S  +  T S+S+        RP+  A LF
Sbjct:   68 GGGGGDRSCSRASDEDDGGSA-RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC-------ETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAA-PSSGGIAATSSSSAAAAAAPDHRPSSFAALF 256          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16
Identity = 63/197 (31.98%), Postives = 98/197 (49.75%), Query Frame = 1
Query:  133 GIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETE-----GSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSV------RPTVAAQLF 690
            G   G+ +       DDG  A  KK RL+ EQ   LE++F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR         E L  +N++L  E+  L++ +      ++          SC   + NS+      + T +  +P +  P+S  +  T S+++       RP+  A LF
Sbjct:  155 GGGGGDRSCSRASDEDDGGSA-RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC-------ETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAA-PSSGGIAATSSSAAAAAAPDHRPSSFAALF 342          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  112 KRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            +R+    G      A G DD  DDGS    KK RL  EQ   LE  F   + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ + Q+L A
Sbjct:  100 ERAEEADGERVSSTAAGRDD-DDDGST--RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRA 214          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  112 KRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            +R+    G      A G DD  DDGS    KK RL  EQ   LE  F   + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ + Q+L A
Sbjct:  100 ERAEEADGERVSSTAAGRDD-DDDGST--RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRA 214          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  109 GKRS----MSFSGIDAGEE----------ANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT 498
            GKRS    +S +G+ +G++          + G  D  +DG +   KK RL+ +Q   LE+ F+  N L P++K+ LA+ L L  RQV +WFQNRRAR K KQ E D + LKR         E L  +N++L  E M L++ +++
Sbjct:   85 GKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCV-------EKLTEENRRLQKEAMELRTLKLS 221          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16
Identity = 61/162 (37.65%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  145 GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT--ESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPT 624
            G    GE D  D       KKRRL+ EQV+ LE +F    KLE  RK+ LA  LGL P+QVA+WFQNRRAR K+K LE+++  LK  ++A    +         L  E++ LK R V   E +   +   GS +   E    + L  S      SP S+  T
Sbjct:   49 GGGGGGEVDGGDP------KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHK-------CHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPSSSFST 197          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16
Identity = 61/162 (37.65%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  145 GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT--ESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPT 624
            G    GE D  D       KKRRL+ EQV+ LE +F    KLE  RK+ LA  LGL P+QVA+WFQNRRAR K+K LE+++  LK  ++A    +         L  E++ LK R V   E +   +   GS +   E    + L  S      SP S+  T
Sbjct:   49 GGGGGGEVDGGDP------KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHK-------CHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPSSSFST 197          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   22 EDEHQTPTSLNPILPSCAPQDFH---GVASFLGKRSMSFSGID-----AGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKL 459
            E+E +   S++   P      F    G+ S+  +R  +   ID     +   A+ ED+  ++GS    KK RL+ +Q   LE +F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR  E++  +   LQ + ++L
Sbjct:  124 EEEEEAVPSMSVSPPDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGST--RKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKEL 275          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1
Query:  178 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            + G     KKRRL+ EQ + LE +F+   KLE  RK+QLA  LGL  +QVA+WFQNRRAR K+K +E+++  L+  ++AV         QN  L  E++ LK R
Sbjct:   53 ESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV-------VLQNCHLETELLKLKER 149          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX28_ORYSI1.201e-1638.89Homeobox-leucine zipper protein HOX28 OS=Oryza sat... [more]
HOX11_ORYSI1.201e-1632.32Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]
HOX11_ORYSJ2.048e-1631.98Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]
HOX19_ORYSJ3.493e-1644.07Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HOX19_ORYSI3.493e-1644.07Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HAT2_ARATH3.493e-1636.81Homeobox-leucine zipper protein HAT2 OS=Arabidopsi... [more]
HOX14_ORYSJ7.783e-1637.65Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HOX14_ORYSI7.783e-1637.65Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HAT14_ARATH1.016e-1535.06Homeobox-leucine zipper protein HAT14 OS=Arabidops... [more]
HOX12_ORYSJ2.264e-1544.23Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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